Search Kitaake
Mutant Information |
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Mutant Name | FN4572-S [Download] |
Generation | M2 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN4572-S Alignment File |
Seed Availability | Yes [Order Seeds] |
Variant Information |
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Single base substitutions: 36
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
SBS | Chr1 | 7452579 | C-T | HET | ||
SBS | Chr1 | 16833900 | C-T | HET | ||
SBS | Chr1 | 18193827 | G-A | HET | ||
SBS | Chr1 | 26977132 | G-A | HOMO | ||
SBS | Chr1 | 39606757 | G-C | HET | ||
SBS | Chr2 | 15316325 | T-A | HET | ||
SBS | Chr2 | 36196083 | G-A | HOMO | ||
SBS | Chr3 | 24962505 | C-T | HOMO | ||
SBS | Chr3 | 30705968 | C-A | HET | ||
SBS | Chr3 | 36670383 | C-T | HET | ||
SBS | Chr4 | 3940760 | A-G | HOMO | ||
SBS | Chr4 | 11136319 | A-T | HOMO | ||
SBS | Chr4 | 30172192 | T-A | HOMO | ||
SBS | Chr5 | 5985609 | G-A | HET | ||
SBS | Chr5 | 14114897 | A-C | HET | ||
SBS | Chr6 | 16087873 | T-G | HET | ||
SBS | Chr7 | 7276021 | T-G | HET | ||
SBS | Chr7 | 10715311 | A-T | HET | ||
SBS | Chr7 | 10873301 | T-C | HET | ||
SBS | Chr8 | 5300498 | C-T | HET | ||
SBS | Chr8 | 28261923 | T-A | HET | ||
SBS | Chr9 | 2338701 | C-A | HET | ||
SBS | Chr9 | 5820532 | T-C | HET | ||
SBS | Chr9 | 15401992 | T-A | HOMO | ||
SBS | Chr9 | 16795646 | C-G | HET | OsKitaake09g124700 | |
SBS | Chr10 | 17574349 | C-A | HOMO | ||
SBS | Chr10 | 17693851 | C-T | HET | ||
SBS | Chr10 | 22264389 | T-C | HOMO | ||
SBS | Chr11 | 3622333 | A-G | HET | OsKitaake11g050000 | |
SBS | Chr11 | 11000196 | G-A | HET | ||
SBS | Chr11 | 12776175 | C-A | HET | ||
SBS | Chr11 | 14000766 | A-G | HET | ||
SBS | Chr11 | 14954393 | C-G | HET | ||
SBS | Chr12 | 13660747 | A-G | HET | ||
SBS | Chr12 | 14684943 | A-T | HET | ||
SBS | Chr12 | 20588204 | A-G | HOMO |
Deletions: 19
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Deletion | Chr3 | 2508053 | 2508057 | 5 | OsKitaake03g035500 |
Deletion | Chr11 | 7427793 | 7427793 | 1 | |
Deletion | Chr10 | 7940319 | 7940324 | 6 | OsKitaake10g050200 |
Deletion | Chr4 | 8945491 | 8945498 | 8 | |
Deletion | Chr7 | 11057684 | 11057684 | 1 | |
Deletion | Chr8 | 12119276 | 12119276 | 1 | |
Deletion | Chr3 | 17421152 | 17421164 | 13 | |
Deletion | Chr10 | 17526304 | 17526306 | 3 | |
Deletion | Chr3 | 18193334 | 18193334 | 1 | |
Deletion | Chr3 | 18359646 | 18359654 | 9 | |
Deletion | Chr10 | 19263489 | 19263489 | 1 | |
Deletion | Chr2 | 20433690 | 20433690 | 1 | |
Deletion | Chr1 | 21727079 | 21727080 | 2 | OsKitaake01g209733 |
Deletion | Chr12 | 22923397 | 22923401 | 5 | |
Deletion | Chr1 | 23693282 | 23693285 | 4 | |
Deletion | Chr11 | 25658964 | 25658965 | 2 | |
Deletion | Chr8 | 26222893 | 26222894 | 2 | |
Deletion | Chr4 | 26349938 | 26349938 | 1 | |
Deletion | Chr3 | 29233823 | 29233824 | 2 |
Insertions: 10