Search Kitaake



Mutant Information 

Mutant NameFN4572-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4572-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr17452579C-THET
SBS  Chr116833900C-THET
SBS  Chr118193827G-AHET
SBS  Chr126977132G-AHOMO
SBS  Chr139606757G-CHET
SBS  Chr215316325T-AHET
SBS  Chr236196083G-AHOMO
SBS  Chr324962505C-THOMO
SBS  Chr330705968C-AHET
SBS  Chr336670383C-THET
SBS  Chr43940760A-GHOMO
SBS  Chr411136319A-THOMO
SBS  Chr430172192T-AHOMO
SBS  Chr55985609G-AHET
SBS  Chr514114897A-CHET
SBS  Chr616087873T-GHET
SBS  Chr77276021T-GHET
SBS  Chr710715311A-THET
SBS  Chr710873301T-CHET
SBS  Chr85300498C-THET
SBS  Chr828261923T-AHET
SBS  Chr92338701C-AHET
SBS  Chr95820532T-CHET
SBS  Chr915401992T-AHOMO
SBS  Chr916795646C-GHETOsKitaake09g124700
SBS  Chr1017574349C-AHOMO
SBS  Chr1017693851C-THET
SBS  Chr1022264389T-CHOMO
SBS  Chr113622333A-GHETOsKitaake11g050000
SBS  Chr1111000196G-AHET
SBS  Chr1112776175C-AHET
SBS  Chr1114000766A-GHET
SBS  Chr1114954393C-GHET
SBS  Chr1213660747A-GHET
SBS  Chr1214684943A-THET
SBS  Chr1220588204A-GHOMO

Deletions: 19

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr3250805325080575OsKitaake03g035500
Deletion  Chr11742779374277931
Deletion  Chr10794031979403246OsKitaake10g050200
Deletion  Chr4894549189454988
Deletion  Chr711057684110576841
Deletion  Chr812119276121192761
Deletion  Chr3174211521742116413
Deletion  Chr1017526304175263063
Deletion  Chr318193334181933341
Deletion  Chr318359646183596549
Deletion  Chr1019263489192634891
Deletion  Chr220433690204336901
Deletion  Chr121727079217270802OsKitaake01g209733
Deletion  Chr1222923397229234015
Deletion  Chr123693282236932854
Deletion  Chr1125658964256589652
Deletion  Chr826222893262228942
Deletion  Chr426349938263499381
Deletion  Chr329233823292338242

Insertions: 10

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr613871280138712832
Insertion  Chr9199601419960172
Insertion  Chr9569582756958302
Insertion  Chr108611231861125018
Insertion  Chr142139669421396722
Insertion  Chr336614366366143692
Insertion  Chr6856713585671382
Insertion  Chr822749142227491441
Insertion  Chr10741494574149471
Insertion  Chr1129619575296195782