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Mutant Information |
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Mutant Name | FN4583-S [Download] |
Generation | M2 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN4583-S Alignment File |
Seed Availability | Yes [Order Seeds] |
Variant Information |
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Single base substitutions: 40
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
SBS | Chr1 | 11524469 | A-C | HET | ||
SBS | Chr1 | 15645893 | A-T | HET | ||
SBS | Chr1 | 17389653 | C-G | HET | ||
SBS | Chr1 | 43450979 | A-T | HET | ||
SBS | Chr2 | 22224130 | G-A | HET | ||
SBS | Chr2 | 26987255 | C-T | HOMO | ||
SBS | Chr2 | 28116503 | C-T | HOMO | ||
SBS | Chr2 | 34405844 | C-T | HET | ||
SBS | Chr3 | 1179803 | A-C | HOMO | ||
SBS | Chr3 | 15179650 | C-T | HOMO | ||
SBS | Chr3 | 15744708 | G-A | HET | ||
SBS | Chr3 | 16341856 | C-T | HET | ||
SBS | Chr3 | 24569589 | T-C | HET | ||
SBS | Chr3 | 27848345 | C-T | HET | ||
SBS | Chr3 | 29697473 | C-A | HET | OsKitaake03g310100 | |
SBS | Chr3 | 32657283 | C-T | HET | OsKitaake03g345700 | |
SBS | Chr3 | 33888091 | C-T | HET | ||
SBS | Chr3 | 34360958 | T-A | HET | ||
SBS | Chr3 | 35695586 | G-A | HOMO | ||
SBS | Chr4 | 2719516 | G-A | HET | ||
SBS | Chr4 | 23832420 | C-T | HET | ||
SBS | Chr4 | 34901981 | G-A | HOMO | ||
SBS | Chr5 | 3473509 | C-T | HET | ||
SBS | Chr5 | 29531737 | G-T | HET | ||
SBS | Chr5 | 30017037 | T-C | HET | ||
SBS | Chr6 | 5209075 | G-C | HET | ||
SBS | Chr6 | 6375595 | T-C | HET | ||
SBS | Chr6 | 18102383 | G-A | HET | ||
SBS | Chr6 | 28730747 | C-T | HOMO | OsKitaake06g265200 | |
SBS | Chr7 | 13547260 | T-C | HET | ||
SBS | Chr7 | 28625949 | A-G | HOMO | ||
SBS | Chr8 | 23509577 | G-A | HET | OsKitaake08g181000 | |
SBS | Chr9 | 14569563 | C-T | HET | ||
SBS | Chr10 | 2570325 | T-C | HET | ||
SBS | Chr11 | 12490021 | A-T | HET | ||
SBS | Chr11 | 24425953 | C-T | HET | ||
SBS | Chr11 | 24425954 | C-T | HET | ||
SBS | Chr11 | 29420560 | A-G | HET | ||
SBS | Chr12 | 7305729 | C-A | HET | ||
SBS | Chr12 | 26390667 | A-G | HET |
Deletions: 19
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Deletion | Chr3 | 2434905 | 2434908 | 4 | |
Deletion | Chr3 | 2750115 | 2750123 | 9 | |
Deletion | Chr4 | 5228966 | 5228971 | 6 | |
Deletion | Chr5 | 5245921 | 5245931 | 11 | OsKitaake05g058800 |
Deletion | Chr5 | 5436310 | 5436524 | 215 | |
Deletion | Chr3 | 6461891 | 6461900 | 10 | |
Deletion | Chr2 | 7384062 | 7384062 | 1 | |
Deletion | Chr10 | 9970001 | 9979000 | 9000 | |
Deletion | Chr2 | 10699739 | 10699740 | 2 | 2 |
Deletion | Chr9 | 10862336 | 10862336 | 1 | |
Deletion | Chr10 | 13401753 | 13401766 | 14 | |
Deletion | Chr2 | 13669734 | 13669736 | 3 | |
Deletion | Chr11 | 15610633 | 15610633 | 1 | |
Deletion | Chr10 | 16586297 | 16586302 | 6 | |
Deletion | Chr7 | 22981575 | 22981579 | 5 | |
Deletion | Chr3 | 27819070 | 27819070 | 1 | 2 |
Deletion | Chr3 | 28804351 | 28804354 | 4 | |
Deletion | Chr2 | 31236775 | 31236782 | 8 | |
Deletion | Chr3 | 33560459 | 33560460 | 2 |
Insertions: 11
Inversions: 1
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
Inversion | Chr10 | 9430365 | 9970031 |