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| Mutant Information |
|---|
| Mutant Name | FN4605-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4605-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 15
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 11779049 | T-C | HOMO | ||
| SBS | Chr2 | 21613488 | C-A | HET | ||
| SBS | Chr2 | 36391583 | A-T | HET | ||
| SBS | Chr3 | 9091056 | G-T | HET | ||
| SBS | Chr3 | 23798959 | G-A | HOMO | ||
| SBS | Chr3 | 28292837 | G-A | HET | ||
| SBS | Chr3 | 34861817 | C-T | HET | ||
| SBS | Chr3 | 37291774 | A-T | HET | ||
| SBS | Chr4 | 26141980 | A-T | HET | ||
| SBS | Chr5 | 27551685 | G-T | HOMO | ||
| SBS | Chr7 | 23691685 | C-T | HOMO | ||
| SBS | Chr7 | 26099679 | C-T | HET | ||
| SBS | Chr8 | 689737 | T-G | HET | ||
| SBS | Chr10 | 7798455 | G-A | HET | ||
| SBS | Chr11 | 26525229 | G-A | HOMO |
Deletions: 9
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 7299 | 7651 | 353 | |
| Deletion | Chr9 | 2737607 | 2737607 | 1 | |
| Deletion | Chr12 | 2819454 | 2819454 | 1 | |
| Deletion | Chr8 | 3440797 | 3440797 | 1 | OsKitaake08g038400 |
| Deletion | Chr6 | 4366688 | 4366688 | 1 | |
| Deletion | Chr3 | 6600942 | 6600950 | 9 | |
| Deletion | Chr1 | 8304789 | 8304789 | 1 | |
| Deletion | Chr10 | 20921917 | 20921924 | 8 | |
| Deletion | Chr11 | 29734660 | 29734715 | 56 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 5459211 | 5459214 | 2 |  |
| Insertion | Chr2 | 32908215 | 32908218 | 2 | |
| Insertion | Chr1 | 37108282 | 37108286 | 3 | |
| Insertion | Chr8 | 333839 | 333841 | 1 |
Inversions: 3
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr4 | 15126174 | 15126367 | |
| Inversion | Chr10 | 19421193 | 20163879 | OsKitaake10g153000 |
| Inversion | Chr1 | 25983183 | 25983322 |
Translocations: 4
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr10 | 11585095 | Chr3 | 2135530 | |
| Translocation | Chr10 | 11585330 | Chr3 | 2135519 | |
| Translocation | Chr10 | 19421198 | Chr6 | 14297116 | |
| Translocation | Chr10 | 20163881 | Chr6 | 14289430 | OsKitaake10g153000 |