Search Kitaake
Mutant Information |
---|
Mutant Name | FN4758-S [Download] |
Generation | M2 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN4758-S Alignment File |
Seed Availability | Yes [Order Seeds] |
Variant Information |
---|
Single base substitutions: 75
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
SBS | Chr1 | 2931837 | G-T | HET | ||
SBS | Chr1 | 3706180 | C-T | HET | ||
SBS | Chr1 | 3994610 | T-A | HOMO | ||
SBS | Chr1 | 9641712 | C-T | HET | ||
SBS | Chr1 | 11933159 | C-A | HOMO | ||
SBS | Chr1 | 20743713 | A-G | HOMO | ||
SBS | Chr1 | 27938036 | C-T | HET | ||
SBS | Chr1 | 32580181 | G-A | HET | ||
SBS | Chr2 | 19871533 | T-A | HET | ||
SBS | Chr2 | 20887396 | A-T | HET | ||
SBS | Chr2 | 32124989 | C-A | HET | ||
SBS | Chr2 | 32611043 | T-C | HET | ||
SBS | Chr3 | 11331542 | G-A | HET | ||
SBS | Chr3 | 14141567 | C-A | HET | ||
SBS | Chr3 | 18445095 | C-T | HOMO | ||
SBS | Chr3 | 20271855 | A-T | HET | ||
SBS | Chr3 | 25181792 | G-A | HET | ||
SBS | Chr3 | 29114431 | A-G | HET | ||
SBS | Chr3 | 35326828 | C-A | HET | ||
SBS | Chr4 | 1812295 | C-T | HET | ||
SBS | Chr4 | 1812299 | G-T | HET | ||
SBS | Chr4 | 9048475 | C-A | HET | ||
SBS | Chr4 | 10516138 | C-A | HET | ||
SBS | Chr4 | 13492564 | C-A | HET | OsKitaake04g064600 | |
SBS | Chr4 | 16877106 | C-T | HET | ||
SBS | Chr4 | 17740093 | G-A | HET | ||
SBS | Chr4 | 18465409 | T-C | HOMO | ||
SBS | Chr4 | 18795434 | G-A | HOMO | ||
SBS | Chr4 | 22157080 | G-A | HOMO | ||
SBS | Chr4 | 22993145 | T-A | HOMO | ||
SBS | Chr4 | 24436466 | G-T | HOMO | ||
SBS | Chr4 | 36353376 | T-C | HET | ||
SBS | Chr5 | 2951589 | G-A | HET | ||
SBS | Chr5 | 3571310 | T-A | HET | ||
SBS | Chr5 | 6531468 | T-A | HET | ||
SBS | Chr5 | 7704046 | G-T | HET | ||
SBS | Chr5 | 9937973 | T-A | HET | ||
SBS | Chr5 | 11717113 | C-T | HET | ||
SBS | Chr5 | 21693623 | G-T | HET | ||
SBS | Chr5 | 21714996 | C-T | HET | ||
SBS | Chr5 | 24263379 | G-T | HET | ||
SBS | Chr6 | 5333485 | A-T | HET | ||
SBS | Chr6 | 6843337 | A-G | HET | ||
SBS | Chr6 | 14542692 | C-T | HOMO | ||
SBS | Chr6 | 20421689 | A-G | HET | ||
SBS | Chr6 | 26305306 | G-T | HOMO | ||
SBS | Chr7 | 1135843 | C-T | HET | ||
SBS | Chr7 | 4613586 | G-T | HET | ||
SBS | Chr7 | 10235460 | G-A | HET | ||
SBS | Chr7 | 12381828 | G-A | HET | ||
SBS | Chr7 | 16437493 | T-C | HET | ||
SBS | Chr7 | 20548985 | G-A | HET | ||
SBS | Chr8 | 7555273 | G-A | HET | ||
SBS | Chr8 | 13476744 | C-A | HET | ||
SBS | Chr9 | 12878843 | C-T | HET | ||
SBS | Chr9 | 12941570 | A-T | HET | ||
SBS | Chr10 | 3644111 | G-A | HET | ||
SBS | Chr10 | 3939823 | A-T | HET | ||
SBS | Chr10 | 5955717 | C-T | HET | ||
SBS | Chr10 | 20268009 | C-T | HET | ||
SBS | Chr10 | 21231944 | A-T | HET | ||
SBS | Chr11 | 3042368 | C-T | HET | ||
SBS | Chr11 | 9101097 | C-T | HET | ||
SBS | Chr11 | 9857117 | G-A | HET | ||
SBS | Chr11 | 15419140 | C-T | HET | ||
SBS | Chr11 | 26095137 | C-T | HOMO | ||
SBS | Chr11 | 26284581 | G-A | HOMO | ||
SBS | Chr12 | 6577589 | T-A | HET | ||
SBS | Chr12 | 11462371 | G-A | HET | ||
SBS | Chr12 | 13220941 | T-A | HET | ||
SBS | Chr12 | 13220942 | T-A | HET | ||
SBS | Chr12 | 13943553 | C-T | HET | ||
SBS | Chr12 | 14447903 | A-G | HET | ||
SBS | Chr12 | 20135405 | G-A | HET | ||
SBS | Chr12 | 26555960 | C-T | HET |
Deletions: 25
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Deletion | Chr3 | 195295 | 195295 | 1 | |
Deletion | Chr10 | 774617 | 774617 | 1 | |
Deletion | Chr6 | 1606775 | 1606783 | 9 | |
Deletion | Chr5 | 4466001 | 4812000 | 346000 | 21 |
Deletion | Chr12 | 6046001 | 6232000 | 186000 | 14 |
Deletion | Chr12 | 6233001 | 6262000 | 29000 | 2 |
Deletion | Chr9 | 8714514 | 8714514 | 1 | |
Deletion | Chr5 | 10306040 | 10306040 | 1 | |
Deletion | Chr8 | 10651488 | 10651488 | 1 | |
Deletion | Chr5 | 13103267 | 13103273 | 7 | |
Deletion | Chr2 | 16004508 | 16004508 | 1 | |
Deletion | Chr1 | 16663685 | 16663686 | 2 | |
Deletion | Chr2 | 18197035 | 18197035 | 1 | |
Deletion | Chr8 | 18646815 | 18646815 | 1 | |
Deletion | Chr5 | 20899864 | 20899864 | 1 | |
Deletion | Chr5 | 21153326 | 21153327 | 2 | |
Deletion | Chr9 | 22498768 | 22498768 | 1 | |
Deletion | Chr5 | 22864505 | 22864514 | 10 | |
Deletion | Chr4 | 24434369 | 24434369 | 1 | |
Deletion | Chr1 | 25794212 | 25794216 | 5 | OsKitaake01g250800 |
Deletion | Chr2 | 26266901 | 26266905 | 5 | |
Deletion | Chr7 | 28035109 | 28035116 | 8 | |
Deletion | Chr7 | 29549252 | 29549253 | 2 | |
Deletion | Chr2 | 32091809 | 32091809 | 1 | |
Deletion | Chr2 | 33411098 | 33411102 | 5 |
Insertions: 11
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Insertion | Chr2 | 2992827 | 2992829 | 1 | |
Insertion | Chr2 | 28650069 | 28650072 | 2 | |
Insertion | Chr2 | 36400692 | 36400694 | 1 | |
Insertion | Chr4 | 27767431 | 27767434 | 2 | |
Insertion | Chr4 | 29056942 | 29056944 | 1 | |
Insertion | Chr5 | 17119400 | 17119403 | 2 | |
Insertion | Chr6 | 18563821 | 18563823 | 1 | |
Insertion | Chr7 | 20467939 | 20467941 | 1 | |
Insertion | Chr9 | 12364906 | 12364908 | 1 | |
Insertion | Chr11 | 1940012 | 1940015 | 2 | |
Insertion | Chr11 | 20432674 | 20432677 | 2 | OsKitaake11g159900 ![]() |
Inversions: 3
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
Inversion | Chr12 | 6045982 | 6854246 | OsKitaake12g078000 |
Inversion | Chr12 | 6262430 | 6854802 | OsKitaake12g078000 |
Inversion | Chr11 | 8990276 | 9960650 |
Translocations: 3
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
Translocation | Chr12 | 6854260 | Chr7 | 22624340 | OsKitaake12g078000 |
Translocation | Chr12 | 6854794 | Chr7 | 22624345 | OsKitaake12g078000 |
Translocation | Chr11 | 8825944 | Chr3 | 3000931 |