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Mutant Information 

Mutant NameFN4758-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN4758-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 75

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr12931837G-THET
SBS  Chr13706180C-THET
SBS  Chr13994610T-AHOMO
SBS  Chr19641712C-THET
SBS  Chr111933159C-AHOMO
SBS  Chr120743713A-GHOMO
SBS  Chr127938036C-THET
SBS  Chr132580181G-AHET
SBS  Chr219871533T-AHET
SBS  Chr220887396A-THET
SBS  Chr232124989C-AHET
SBS  Chr232611043T-CHET
SBS  Chr311331542G-AHET
SBS  Chr314141567C-AHET
SBS  Chr318445095C-THOMO
SBS  Chr320271855A-THET
SBS  Chr325181792G-AHET
SBS  Chr329114431A-GHET
SBS  Chr335326828C-AHET
SBS  Chr41812295C-THET
SBS  Chr41812299G-THET
SBS  Chr49048475C-AHET
SBS  Chr410516138C-AHET
SBS  Chr413492564C-AHETOsKitaake04g064600
SBS  Chr416877106C-THET
SBS  Chr417740093G-AHET
SBS  Chr418465409T-CHOMO
SBS  Chr418795434G-AHOMO
SBS  Chr422157080G-AHOMO
SBS  Chr422993145T-AHOMO
SBS  Chr424436466G-THOMO
SBS  Chr436353376T-CHET
SBS  Chr52951589G-AHET
SBS  Chr53571310T-AHET
SBS  Chr56531468T-AHET
SBS  Chr57704046G-THET
SBS  Chr59937973T-AHET
SBS  Chr511717113C-THET
SBS  Chr521693623G-THET
SBS  Chr521714996C-THET
SBS  Chr524263379G-THET
SBS  Chr65333485A-THET
SBS  Chr66843337A-GHET
SBS  Chr614542692C-THOMO
SBS  Chr620421689A-GHET
SBS  Chr626305306G-THOMO
SBS  Chr71135843C-THET
SBS  Chr74613586G-THET
SBS  Chr710235460G-AHET
SBS  Chr712381828G-AHET
SBS  Chr716437493T-CHET
SBS  Chr720548985G-AHET
SBS  Chr87555273G-AHET
SBS  Chr813476744C-AHET
SBS  Chr912878843C-THET
SBS  Chr912941570A-THET
SBS  Chr103644111G-AHET
SBS  Chr103939823A-THET
SBS  Chr105955717C-THET
SBS  Chr1020268009C-THET
SBS  Chr1021231944A-THET
SBS  Chr113042368C-THET
SBS  Chr119101097C-THET
SBS  Chr119857117G-AHET
SBS  Chr1115419140C-THET
SBS  Chr1126095137C-THOMO
SBS  Chr1126284581G-AHOMO
SBS  Chr126577589T-AHET
SBS  Chr1211462371G-AHET
SBS  Chr1213220941T-AHET
SBS  Chr1213220942T-AHET
SBS  Chr1213943553C-THET
SBS  Chr1214447903A-GHET
SBS  Chr1220135405G-AHET
SBS  Chr1226555960C-THET

Deletions: 25

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr31952951952951
Deletion  Chr107746177746171
Deletion  Chr6160677516067839
Deletion  Chr54466001481200034600021
Deletion  Chr126046001623200018600014
Deletion  Chr1262330016262000290002
Deletion  Chr9871451487145141
Deletion  Chr510306040103060401
Deletion  Chr810651488106514881
Deletion  Chr513103267131032737
Deletion  Chr216004508160045081
Deletion  Chr116663685166636862
Deletion  Chr218197035181970351
Deletion  Chr818646815186468151
Deletion  Chr520899864208998641
Deletion  Chr521153326211533272
Deletion  Chr922498768224987681
Deletion  Chr5228645052286451410
Deletion  Chr424434369244343691
Deletion  Chr125794212257942165OsKitaake01g250800
Deletion  Chr226266901262669055
Deletion  Chr728035109280351168
Deletion  Chr729549252295492532
Deletion  Chr232091809320918091
Deletion  Chr233411098334111025

Insertions: 11

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr2299282729928291
Insertion  Chr228650069286500722
Insertion  Chr236400692364006941
Insertion  Chr427767431277674342
Insertion  Chr429056942290569441
Insertion  Chr517119400171194032
Insertion  Chr618563821185638231
Insertion  Chr720467939204679411
Insertion  Chr912364906123649081
Insertion  Chr11194001219400152
Insertion  Chr1120432674204326772OsKitaake11g159900 image

Inversions: 3

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr1260459826854246OsKitaake12g078000
Inversion  Chr1262624306854802OsKitaake12g078000
Inversion  Chr1189902769960650

Translocations: 3

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr126854260Chr722624340OsKitaake12g078000
Translocation  Chr126854794Chr722624345OsKitaake12g078000
Translocation  Chr118825944Chr33000931