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| Mutant Information |
|---|
| Mutant Name | FN4766-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4766-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 31
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 8603551 | T-G | HET | ||
| SBS | Chr1 | 41397037 | G-A | HOMO | ||
| SBS | Chr2 | 4033708 | T-A | HOMO | ||
| SBS | Chr2 | 5325676 | G-A | HET | ||
| SBS | Chr2 | 6287845 | C-T | HET | OsKitaake02g085000 | |
| SBS | Chr2 | 25002580 | G-A | HET | ||
| SBS | Chr3 | 2442626 | G-A | HOMO | ||
| SBS | Chr3 | 25617256 | C-T | HET | ||
| SBS | Chr4 | 502940 | C-T | HET | ||
| SBS | Chr4 | 8635904 | C-T | HET | ||
| SBS | Chr4 | 12846085 | T-C | HET | ||
| SBS | Chr4 | 27941413 | C-T | HET | ||
| SBS | Chr5 | 26135073 | G-A | HOMO | ||
| SBS | Chr6 | 17615062 | A-G | HET | ||
| SBS | Chr6 | 27314998 | C-A | HET | ||
| SBS | Chr7 | 4724622 | C-T | HOMO | ||
| SBS | Chr7 | 14950348 | T-A | HOMO | ||
| SBS | Chr8 | 13740377 | G-T | HET | ||
| SBS | Chr8 | 17274750 | G-A | HOMO | ||
| SBS | Chr8 | 18947331 | A-G | HET | ||
| SBS | Chr8 | 20656349 | C-T | HET | ||
| SBS | Chr8 | 24230156 | C-T | HET | OsKitaake08g187400 | |
| SBS | Chr9 | 15816617 | C-T | HET | ||
| SBS | Chr10 | 22660975 | T-A | HOMO | ||
| SBS | Chr11 | 13587053 | G-A | HET | ||
| SBS | Chr11 | 29601367 | G-A | HOMO | ||
| SBS | Chr12 | 1408051 | C-T | HET | ||
| SBS | Chr12 | 1408052 | G-T | HET | ||
| SBS | Chr12 | 7060420 | G-C | HET | ||
| SBS | Chr12 | 19763567 | G-A | HET | ||
| SBS | Chr12 | 20183287 | G-T | HET |
Deletions: 25
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 19836 | 20189 | 354 | |
| Deletion | Chr1 | 615828 | 615829 | 2 | OsKitaake01g114000 |
| Deletion | Chr2 | 1107831 | 1107831 | 1 | |
| Deletion | Chr4 | 2238597 | 2238610 | 14 | OsKitaake04g014100 |
| Deletion | Chr4 | 3463818 | 3463818 | 1 | |
| Deletion | Chr2 | 5376604 | 5376604 | 1 | |
| Deletion | Chr1 | 5623001 | 5646000 | 23000 | 3 |
| Deletion | Chr2 | 6299610 | 6299616 | 7 | |
| Deletion | Chr6 | 7671324 | 7671333 | 10 | |
| Deletion | Chr7 | 7727323 | 7727323 | 1 | |
| Deletion | Chr5 | 8537712 | 8537716 | 5 | |
| Deletion | Chr9 | 9875586 | 9875588 | 3 | |
| Deletion | Chr2 | 10534147 | 10534153 | 7 | |
| Deletion | Chr12 | 11667308 | 11667462 | 155 | |
| Deletion | Chr11 | 11746046 | 11746054 | 9 | |
| Deletion | Chr8 | 12107769 | 12107770 | 2 | |
| Deletion | Chr2 | 12352590 | 12352594 | 5 | |
| Deletion | Chr11 | 15130717 | 15130718 | 2 | |
| Deletion | Chr8 | 16634932 | 16634934 | 3 | |
| Deletion | Chr8 | 16798151 | 16798152 | 2 | |
| Deletion | Chr1 | 19899590 | 19899591 | 2 | |
| Deletion | Chr12 | 21973426 | 21973430 | 5 | OsKitaake12g172400 |
| Deletion | Chr12 | 22372414 | 22372414 | 1 | |
| Deletion | Chr2 | 27170303 | 27170304 | 2 | |
| Deletion | Chr1 | 41390224 | 41390228 | 5 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr11 | 900007 | 900009 | 1 | |
| Insertion | Chr1 | 31084167 | 31084169 | 1 | |
| Insertion | Chr3 | 15986072 | 15986075 | 2 | |
| Insertion | Chr3 | 36461167 | 36461169 | 1 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr2 | 10908436 | 11041140 | |
| Inversion | Chr2 | 10908441 | 11041147 |