Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN4777-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN4777-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 25
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 30653538 | T-A | HET | ||
| SBS | Chr2 | 4836360 | C-T | HET | ||
| SBS | Chr2 | 6915153 | T-G | HET | ||
| SBS | Chr2 | 29890292 | T-G | HET | ||
| SBS | Chr2 | 30369758 | T-A | HET | ||
| SBS | Chr3 | 2357068 | T-C | HOMO | ||
| SBS | Chr3 | 36622362 | G-A | HET | ||
| SBS | Chr4 | 5921509 | C-A | HOMO | ||
| SBS | Chr4 | 22198755 | G-T | HET | ||
| SBS | Chr5 | 12316454 | A-T | HOMO | ||
| SBS | Chr5 | 27938008 | G-A | HET | OsKitaake05g257200 | |
| SBS | Chr6 | 4531769 | G-A | HET | ||
| SBS | Chr6 | 17342785 | T-C | HET | ||
| SBS | Chr6 | 18880680 | T-C | HET | ||
| SBS | Chr7 | 688784 | C-T | HET | ||
| SBS | Chr7 | 2348769 | C-T | HET | ||
| SBS | Chr7 | 2348770 | C-A | HET | ||
| SBS | Chr7 | 2348771 | C-A | HET | ||
| SBS | Chr8 | 21534050 | T-A | HET | ||
| SBS | Chr8 | 25310908 | G-T | HET | OsKitaake08g197900 | |
| SBS | Chr10 | 17648257 | C-G | HET | ||
| SBS | Chr11 | 14545660 | A-G | HET | ||
| SBS | Chr11 | 23435451 | T-G | HOMO | OsKitaake11g186700 | |
| SBS | Chr12 | 4278800 | A-G | HOMO | ||
| SBS | Chr12 | 24662195 | T-A | HOMO |
Deletions: 14
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr3 | 246300 | 246300 | 1 | OsKitaake03g003500 |
| Deletion | Chr9 | 1905370 | 1905372 | 3 | |
| Deletion | Chr11 | 3639189 | 3639189 | 1 | |
| Deletion | Chr7 | 4682722 | 4682722 | 1 | |
| Deletion | Chr2 | 6765576 | 6765576 | 1 | |
| Deletion | Chr3 | 9408961 | 9408962 | 2 | |
| Deletion | Chr9 | 15170665 | 15170672 | 8 | |
| Deletion | Chr1 | 17191564 | 17191718 | 155 | |
| Deletion | Chr1 | 21720014 | 21720014 | 1 | |
| Deletion | Chr1 | 27005390 | 27005396 | 7 | |
| Deletion | Chr7 | 27751820 | 27751820 | 1 | |
| Deletion | Chr8 | 27910742 | 27910742 | 1 | |
| Deletion | Chr6 | 30862461 | 30862473 | 13 | |
| Deletion | Chr2 | 35269616 | 35269616 | 1 |
Insertions: 7
Inversions: 5
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr6 | 25570376 | 25572497 | OsKitaake06g227100 |
| Inversion | Chr1 | 29969957 | 30052720 | 2 |
| Inversion | Chr1 | 29970041 | 30052731 | 2 |
| Inversion | Chr4 | 30452317 | 30528262 | OsKitaake04g234901 |
| Inversion | Chr4 | 30452320 | 30528262 | OsKitaake04g234901 |