Search Kitaake

Mutant Information

Mutant Name	FN508-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN508-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 32

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 9765356 C-G Hetero INTERGENIC
SBS Chr1 20615728 C-T Hetero INTERGENIC
SBS Chr1 21525287 A-G Hetero INTERGENIC
SBS Chr1 21525288 A-T Hetero INTERGENIC
SBS Chr1 27403666 C-T Hetero INTERGENIC
SBS Chr1 43333067 G-A Hetero INTERGENIC
SBS Chr2 29885863 T-G Hetero SYNONYMOUS_CODING
SBS Chr3 1221731 C-G Hetero INTERGENIC
SBS Chr3 5430304 C-T Hetero INTERGENIC
SBS Chr3 25430931 C-T Homo INTERGENIC
SBS Chr3 35693058 G-A Hetero INTERGENIC
SBS Chr4 17526706 A-T Hetero INTRON
SBS Chr5 15518080 A-G Hetero INTERGENIC
SBS Chr5 18767354 G-T Hetero INTERGENIC
SBS Chr5 21679379 C-A Hetero INTERGENIC
SBS Chr6 5847692 C-T Hetero INTERGENIC
SBS Chr6 12925039 C-T Homo INTERGENIC
SBS Chr6 18067073 T-A Homo INTERGENIC
SBS Chr6 28340644 C-G Homo INTERGENIC
SBS Chr7 7091402 G-T Homo INTERGENIC
SBS Chr7 8349770 G-T Homo NON_SYNONYMOUS_CODING OsKitaake07g090850
SBS Chr9 8698268 T-A Hetero INTERGENIC
SBS Chr9 13484492 C-G Homo INTERGENIC
SBS Chr10 17135917 G-A Hetero INTERGENIC
SBS Chr10 17371895 C-A Homo INTERGENIC
SBS Chr10 21584628 T-A Hetero INTERGENIC
SBS Chr11 12269601 A-T Hetero INTRON
SBS Chr11 18597684 C-T Hetero INTERGENIC
SBS Chr11 25511281 T-C Hetero INTERGENIC
SBS Chr11 26079082 T-A Hetero INTERGENIC
SBS Chr12 6710308 C-T Hetero INTERGENIC
SBS Chr12 7331658 C-T Hetero INTERGENIC

Deletions: 11

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr1 5976402 5976403 1
Deletion Chr4 7276793 7276794 1
Deletion Chr8 10683908 10683912 4
Deletion Chr6 14279243 14279248 5
Deletion Chr11 14913312 14913317 5
Deletion Chr7 16843498 16843499 1
Deletion Chr10 20247954 20247956 2
Deletion Chr5 21070895 21070906 11
Deletion Chr2 25727046 25727049 3
Deletion Chr11 27499001 27598000 98999 7
Deletion Chr1 38310867 38310869 2

Insertions: 4

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr2 128122 128125 2
Insertion Chr11 26692277 26692280 2
Insertion Chr5 30226359 30226361 1
Insertion Chr12 26049535 26049537 1

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	9765356	C-G	Hetero	INTERGENIC
SBS	Chr1	20615728	C-T	Hetero	INTERGENIC
SBS	Chr1	21525287	A-G	Hetero	INTERGENIC
SBS	Chr1	21525288	A-T	Hetero	INTERGENIC
SBS	Chr1	27403666	C-T	Hetero	INTERGENIC
SBS	Chr1	43333067	G-A	Hetero	INTERGENIC
SBS	Chr2	29885863	T-G	Hetero	SYNONYMOUS_CODING
SBS	Chr3	1221731	C-G	Hetero	INTERGENIC
SBS	Chr3	5430304	C-T	Hetero	INTERGENIC
SBS	Chr3	25430931	C-T	Homo	INTERGENIC
SBS	Chr3	35693058	G-A	Hetero	INTERGENIC
SBS	Chr4	17526706	A-T	Hetero	INTRON
SBS	Chr5	15518080	A-G	Hetero	INTERGENIC
SBS	Chr5	18767354	G-T	Hetero	INTERGENIC
SBS	Chr5	21679379	C-A	Hetero	INTERGENIC
SBS	Chr6	5847692	C-T	Hetero	INTERGENIC
SBS	Chr6	12925039	C-T	Homo	INTERGENIC
SBS	Chr6	18067073	T-A	Homo	INTERGENIC
SBS	Chr6	28340644	C-G	Homo	INTERGENIC
SBS	Chr7	7091402	G-T	Homo	INTERGENIC
SBS	Chr7	8349770	G-T	Homo	NON_SYNONYMOUS_CODING	OsKitaake07g090850
SBS	Chr9	8698268	T-A	Hetero	INTERGENIC
SBS	Chr9	13484492	C-G	Homo	INTERGENIC
SBS	Chr10	17135917	G-A	Hetero	INTERGENIC
SBS	Chr10	17371895	C-A	Homo	INTERGENIC
SBS	Chr10	21584628	T-A	Hetero	INTERGENIC
SBS	Chr11	12269601	A-T	Hetero	INTRON
SBS	Chr11	18597684	C-T	Hetero	INTERGENIC
SBS	Chr11	25511281	T-C	Hetero	INTERGENIC
SBS	Chr11	26079082	T-A	Hetero	INTERGENIC
SBS	Chr12	6710308	C-T	Hetero	INTERGENIC
SBS	Chr12	7331658	C-T	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr1	5976402	5976403	1
Deletion	Chr4	7276793	7276794	1
Deletion	Chr8	10683908	10683912	4
Deletion	Chr6	14279243	14279248	5
Deletion	Chr11	14913312	14913317	5
Deletion	Chr7	16843498	16843499	1
Deletion	Chr10	20247954	20247956	2
Deletion	Chr5	21070895	21070906	11
Deletion	Chr2	25727046	25727049	3
Deletion	Chr11	27499001	27598000	98999	7
Deletion	Chr1	38310867	38310869	2

Main menu

You are here

Search Kitaake

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes