Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN525-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN525-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 23
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 9059254 | C-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 12694392 | C-G | Homo | INTRON | |
| SBS | Chr1 | 28225075 | T-C | Homo | INTERGENIC | |
| SBS | Chr1 | 33711582 | G-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 40805974 | C-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 17867866 | A-C | Homo | INTERGENIC | |
| SBS | Chr2 | 18620102 | A-T | Homo | INTERGENIC | |
| SBS | Chr2 | 34683233 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 34683234 | G-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 340257 | T-C | Hetero | INTERGENIC | |
| SBS | Chr3 | 27183988 | T-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 2767320 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 26514416 | C-T | Hetero | INTERGENIC | |
| SBS | Chr7 | 15821440 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 20509793 | C-A | Homo | INTERGENIC | |
| SBS | Chr8 | 24328908 | T-A | Homo | INTERGENIC | |
| SBS | Chr8 | 27875387 | A-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 2401112 | A-G | Homo | INTERGENIC | |
| SBS | Chr10 | 4030507 | C-T | Homo | INTERGENIC | |
| SBS | Chr11 | 11885363 | C-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 13981535 | T-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 22269378 | A-G | Hetero | UTR_3_PRIME | |
| SBS | Chr12 | 23362843 | T-A | Hetero | UTR_5_PRIME |
Deletions: 16
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 7105 | 7456 | 351 | |
| Deletion | Chr7 | 4238446 | 4238447 | 1 | OsKitaake07g053500 |
| Deletion | Chr11 | 4414378 | 4414380 | 2 | |
| Deletion | Chr8 | 5064001 | 5073000 | 8999 | |
| Deletion | Chr10 | 5890589 | 5890594 | 5 | |
| Deletion | Chr9 | 8425778 | 8425782 | 4 | |
| Deletion | Chr10 | 9417948 | 9417955 | 7 | |
| Deletion | Chr8 | 9530837 | 9530838 | 1 | |
| Deletion | Chr7 | 16690376 | 16690383 | 7 | |
| Deletion | Chr12 | 17174343 | 17174352 | 9 | OsKitaake12g126600 |
| Deletion | Chr11 | 21149867 | 21149874 | 7 | |
| Deletion | Chr6 | 21271616 | 21271617 | 1 | OsKitaake06g188500 |
| Deletion | Chr5 | 21420929 | 21420932 | 3 | |
| Deletion | Chr1 | 22453139 | 22453140 | 1 | |
| Deletion | Chr8 | 23891001 | 23925000 | 33999 | |
| Deletion | Chr1 | 30478495 | 30478496 | 1 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr7 | 20058039 | 20058042 | 2 | |
| Insertion | Chr8 | 5499959 | 5499962 | 2 | |
| Insertion | Chr10 | 12431581 | 12431584 | 2 | |
| Insertion | Chr11 | 25162046 | 25162048 | 1 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr5 | 25757732 | Chr2 | 30718360 | |
| Translocation | Chr5 | 25762590 | Chr2 | 30718357 | OsKitaake05g226400 |