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Mutant Information

Mutant Name	FN75-S-43 [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN75-S-43 Alignment File
Seed Availability	No

Variant Information

Single base substitutions: 14

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10226424	G-T	Hetero	INTERGENIC
SBS	Chr1	14020467	G-C	Hetero	UTR_5_PRIME
SBS	Chr3	17773172	C-T	Hetero	INTERGENIC
SBS	Chr3	24122674	C-T	Hetero	INTERGENIC
SBS	Chr4	23046423	G-C	Hetero	SPLICE_SITE_REGION
SBS	Chr5	9265251	C-G	Hetero	INTERGENIC
SBS	Chr7	3601959	T-A	Hetero	INTERGENIC
SBS	Chr7	21104349	C-G	Hetero	INTERGENIC
SBS	Chr7	22622246	G-A	Hetero	INTERGENIC
SBS	Chr8	15509515	T-C	Hetero	INTERGENIC
SBS	Chr9	17139178	G-A	Hetero	INTERGENIC
SBS	Chr11	23611262	T-C	Homo	INTERGENIC
SBS	Chr11	28773252	C-A	Hetero	INTERGENIC
SBS	Chr12	9792105	T-G	Hetero	INTERGENIC

Deletions: 3

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr7	4078438	4078442	4
Deletion	Chr6	14460412	14460413	1
Deletion	Chr5	27717863	27717865	2

Insertions: 2

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Insertion	Chr5	29525558	29525561	2
Insertion	Chr8	29145562	29145570	7