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| Mutant Information |
|---|
| Mutant Name | FN757-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN757-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 26
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 40489823 | T-G | Homo | INTERGENIC | |
| SBS | Chr1 | 44056547 | A-T | Homo | INTERGENIC | |
| SBS | Chr3 | 16544077 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 20623777 | T-C | Hetero | INTERGENIC | |
| SBS | Chr4 | 8099063 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 15268481 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 15797141 | T-C | Hetero | INTRON | |
| SBS | Chr4 | 33449691 | T-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 59965 | C-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 1718115 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 18075771 | G-A | Homo | INTERGENIC | |
| SBS | Chr7 | 9014706 | A-G | Homo | INTRON | |
| SBS | Chr8 | 5545366 | T-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 13018271 | C-G | Homo | INTERGENIC | |
| SBS | Chr8 | 18800072 | T-C | Homo | INTERGENIC | |
| SBS | Chr8 | 21780379 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 2632177 | A-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 7611548 | G-C | Hetero | INTERGENIC | |
| SBS | Chr9 | 9505664 | G-A | Hetero | INTRON | |
| SBS | Chr9 | 11198633 | A-T | Hetero | INTRON | |
| SBS | Chr9 | 21914145 | C-A | Homo | INTERGENIC | |
| SBS | Chr10 | 21936091 | A-G | Hetero | NON_SYNONYMOUS_CODING | OsKitaake10g177100 |
| SBS | Chr11 | 1871585 | A-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 4409456 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 19820128 | T-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 15740366 | T-C | Homo | INTERGENIC |
Deletions: 16
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr11 | 2752625 | 2752839 | 214 | |
| Deletion | Chr1 | 2788794 | 2788795 | 1 | |
| Deletion | Chr8 | 2794759 | 2795089 | 330 | |
| Deletion | Chr12 | 3801060 | 3801062 | 2 | |
| Deletion | Chr11 | 6905896 | 6905897 | 1 | OsKitaake11g079910 |
| Deletion | Chr12 | 9876659 | 9876805 | 146 | |
| Deletion | Chr6 | 11745001 | 11774000 | 28999 | 3 |
| Deletion | Chr8 | 13396002 | 13396008 | 6 | |
| Deletion | Chr12 | 15140001 | 15184000 | 43999 | OsKitaake12g119000 |
| Deletion | Chr11 | 15165885 | 15165887 | 2 | |
| Deletion | Chr11 | 16942600 | 16942601 | 1 | |
| Deletion | Chr12 | 18339424 | 18339534 | 110 | |
| Deletion | Chr5 | 18424781 | 18424789 | 8 | |
| Deletion | Chr8 | 24642272 | 24642280 | 8 | OsKitaake08g192100 |
| Deletion | Chr3 | 24765528 | 24765529 | 1 | |
| Deletion | Chr12 | 25183612 | 25183616 | 4 |
Insertions: 1
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 13865666 | 13865669 | 2 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr9 | 13285639 | 14185037 | OsKitaake09g095400 |
| Inversion | Chr9 | 13285641 | 14185033 | OsKitaake09g095400 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr6 | 9591416 | Chr5 | 10067658 | OsKitaake06g113000 |
| Translocation | Chr6 | 9595112 | Chr5 | 10067656 | OsKitaake06g113000 |