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Mutant Information

Mutant Name	FN763-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN763-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 26

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 119195 G-A Hetero INTERGENIC
SBS Chr1 21002541 G-A Homo INTERGENIC
SBS Chr1 38732829 G-A Hetero INTRON
SBS Chr1 43524012 G-A Hetero INTRON
SBS Chr3 32379414 G-A Homo UTR_3_PRIME
SBS Chr4 16005361 C-A Hetero INTERGENIC
SBS Chr4 32185454 C-T Homo INTERGENIC
SBS Chr4 33806794 T-C Homo INTERGENIC
SBS Chr5 7249678 G-A Hetero INTERGENIC
SBS Chr6 16175928 G-T Homo INTERGENIC
SBS Chr6 25250653 G-A Homo INTERGENIC
SBS Chr6 29236296 G-T Hetero INTERGENIC
SBS Chr7 1129778 G-C Hetero UTR_3_PRIME
SBS Chr7 9084043 T-C Hetero INTERGENIC
SBS Chr8 20295494 C-G Hetero INTERGENIC
SBS Chr9 4172313 C-T Hetero INTERGENIC
SBS Chr9 13195047 G-A Homo INTERGENIC
SBS Chr9 13975254 C-T Hetero INTERGENIC
SBS Chr9 17003640 T-A Hetero INTERGENIC
SBS Chr9 20669266 A-T Hetero INTERGENIC
SBS Chr10 4340023 G-A Hetero INTERGENIC
SBS Chr10 12911509 G-A Hetero INTERGENIC
SBS Chr11 8684694 A-G Homo INTERGENIC
SBS Chr11 27662366 T-C Homo INTERGENIC
SBS Chr12 5827777 T-C Homo INTERGENIC
SBS Chr12 11262804 G-A Hetero INTERGENIC

Deletions: 22

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr4 3316340 3316348 8
Deletion Chr3 4089589 4089590 1
Deletion Chr3 5070714 5070716 2
Deletion Chr4 5860752 5860754 2
Deletion Chr11 10366782 10366788 6
Deletion Chr11 10964936 10964942 6
Deletion Chr3 14219721 14219724 3
Deletion Chr11 16991160 16991162 2
Deletion Chr10 17695972 17695973 1
Deletion Chr2 17959355 17959357 2
Deletion Chr2 18342528 18342529 1
Deletion Chr6 20098250 20098317 67
Deletion Chr4 20675308 20675309 1
Deletion Chr2 21014964 21014966 2
Deletion Chr4 21758001 21779000 20999 3
Deletion Chr8 23024116 23024125 9
Deletion Chr6 24466234 24466242 8 OsKitaake06g216200
Deletion Chr3 24750312 24750318 6
Deletion Chr6 26459521 26459525 4
Deletion Chr1 30623313 30623326 13
Deletion Chr3 37428821 37428911 90
Deletion Chr1 43616957 43616958 1

Insertions: 3

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr2 27253932 27253935 2
Insertion Chr10 4427109 4427111 1
Insertion Chr12 16125353 16125355 1

Translocations: 1

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr8 6896938 Chr7 15442884

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	119195	G-A	Hetero	INTERGENIC
SBS	Chr1	21002541	G-A	Homo	INTERGENIC
SBS	Chr1	38732829	G-A	Hetero	INTRON
SBS	Chr1	43524012	G-A	Hetero	INTRON
SBS	Chr3	32379414	G-A	Homo	UTR_3_PRIME
SBS	Chr4	16005361	C-A	Hetero	INTERGENIC
SBS	Chr4	32185454	C-T	Homo	INTERGENIC
SBS	Chr4	33806794	T-C	Homo	INTERGENIC
SBS	Chr5	7249678	G-A	Hetero	INTERGENIC
SBS	Chr6	16175928	G-T	Homo	INTERGENIC
SBS	Chr6	25250653	G-A	Homo	INTERGENIC
SBS	Chr6	29236296	G-T	Hetero	INTERGENIC
SBS	Chr7	1129778	G-C	Hetero	UTR_3_PRIME
SBS	Chr7	9084043	T-C	Hetero	INTERGENIC
SBS	Chr8	20295494	C-G	Hetero	INTERGENIC
SBS	Chr9	4172313	C-T	Hetero	INTERGENIC
SBS	Chr9	13195047	G-A	Homo	INTERGENIC
SBS	Chr9	13975254	C-T	Hetero	INTERGENIC
SBS	Chr9	17003640	T-A	Hetero	INTERGENIC
SBS	Chr9	20669266	A-T	Hetero	INTERGENIC
SBS	Chr10	4340023	G-A	Hetero	INTERGENIC
SBS	Chr10	12911509	G-A	Hetero	INTERGENIC
SBS	Chr11	8684694	A-G	Homo	INTERGENIC
SBS	Chr11	27662366	T-C	Homo	INTERGENIC
SBS	Chr12	5827777	T-C	Homo	INTERGENIC
SBS	Chr12	11262804	G-A	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr4	3316340	3316348	8
Deletion	Chr3	4089589	4089590	1
Deletion	Chr3	5070714	5070716	2
Deletion	Chr4	5860752	5860754	2
Deletion	Chr11	10366782	10366788	6
Deletion	Chr11	10964936	10964942	6
Deletion	Chr3	14219721	14219724	3
Deletion	Chr11	16991160	16991162	2
Deletion	Chr10	17695972	17695973	1
Deletion	Chr2	17959355	17959357	2
Deletion	Chr2	18342528	18342529	1
Deletion	Chr6	20098250	20098317	67
Deletion	Chr4	20675308	20675309	1
Deletion	Chr2	21014964	21014966	2
Deletion	Chr4	21758001	21779000	20999	3
Deletion	Chr8	23024116	23024125	9
Deletion	Chr6	24466234	24466242	8	OsKitaake06g216200
Deletion	Chr3	24750312	24750318	6
Deletion	Chr6	26459521	26459525	4
Deletion	Chr1	30623313	30623326	13
Deletion	Chr3	37428821	37428911	90
Deletion	Chr1	43616957	43616958	1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	6896938	Chr7	15442884

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes