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| Mutant Information |
|---|
| Mutant Name | FN767-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN767-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 22
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 1544713 | A-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 23213391 | C-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 25450094 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 1162460 | T-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 4835120 | G-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 7914237 | A-C | Homo | INTERGENIC | |
| SBS | Chr2 | 8365091 | G-C | Homo | INTERGENIC | |
| SBS | Chr2 | 31771838 | A-G | Homo | INTERGENIC | |
| SBS | Chr3 | 16222277 | G-T | Homo | UTR_3_PRIME | |
| SBS | Chr3 | 25567480 | G-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 1845158 | T-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 10141174 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 1474693 | G-C | Homo | UTR_3_PRIME | |
| SBS | Chr8 | 18522304 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 5077561 | C-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 19496439 | C-T | Hetero | STOP_GAINED | OsKitaake09g159050 |
| SBS | Chr10 | 10162247 | A-G | Homo | INTERGENIC | |
| SBS | Chr10 | 12000507 | A-G | Homo | INTRON | |
| SBS | Chr10 | 20710399 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 18850343 | C-T | Homo | INTERGENIC | |
| SBS | Chr11 | 20305533 | C-A | Homo | INTERGENIC | |
| SBS | Chr12 | 21113459 | C-A | Hetero | INTERGENIC |
Deletions: 19
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 63619 | 63620 | 1 | |
| Deletion | Chr10 | 911861 | 911863 | 2 | |
| Deletion | Chr8 | 3776625 | 3776628 | 3 | |
| Deletion | Chr8 | 5783487 | 5783488 | 1 | |
| Deletion | Chr7 | 6153481 | 6153484 | 3 | |
| Deletion | Chr8 | 6655911 | 6655919 | 8 | |
| Deletion | Chr4 | 9744805 | 9744808 | 3 | |
| Deletion | Chr2 | 10302250 | 10302251 | 1 | |
| Deletion | Chr12 | 11716620 | 11716785 | 165 | |
| Deletion | Chr5 | 13027915 | 13027920 | 5 | |
| Deletion | Chr7 | 17270838 | 17270930 | 92 | |
| Deletion | Chr11 | 19512354 | 19512358 | 4 | |
| Deletion | Chr5 | 23352728 | 23353144 | 416 | |
| Deletion | Chr8 | 23399249 | 23399252 | 3 | |
| Deletion | Chr2 | 24410683 | 24410685 | 2 | |
| Deletion | Chr4 | 25432259 | 25432260 | 1 | OsKitaake04g174300 |
| Deletion | Chr7 | 25932240 | 25932242 | 2 | |
| Deletion | Chr3 | 29132300 | 29132302 | 2 | OsKitaake03g302800 |
| Deletion | Chr3 | 35412227 | 35412228 | 1 | OsKitaake03g388600 |
Insertions: 2
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr2 | 13756014 | 13756016 | 1 | |
| Insertion | Chr5 | 12594783 | 12594785 | 1 |