Search Kitaake
| Mutant Information |
|---|
| Mutant Name | FN803-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN803-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 30
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 1339062 | C-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 6160591 | G-A | Hetero | SYNONYMOUS_CODING | |
| SBS | Chr1 | 10094970 | T-C | Homo | INTERGENIC | |
| SBS | Chr1 | 12121338 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 2003473 | C-T | Homo | UTR_5_PRIME | |
| SBS | Chr2 | 8212961 | T-G | Hetero | INTERGENIC | |
| SBS | Chr2 | 19020910 | C-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 21970738 | G-T | Hetero | INTRON | |
| SBS | Chr3 | 4476410 | C-T | Homo | INTERGENIC | |
| SBS | Chr3 | 8384849 | G-A | Homo | INTERGENIC | |
| SBS | Chr3 | 9293657 | C-T | Homo | INTERGENIC | |
| SBS | Chr3 | 12298074 | G-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 28442205 | C-T | Hetero | INTRON | |
| SBS | Chr4 | 978947 | A-T | Homo | INTERGENIC | |
| SBS | Chr4 | 24296126 | T-A | Homo | NON_SYNONYMOUS_CODING | OsKitaake04g156500 |
| SBS | Chr5 | 3250842 | C-A | Hetero | NON_SYNONYMOUS_CODING | OsKitaake05g038800 |
| SBS | Chr5 | 8408652 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 29385307 | G-A | Homo | INTERGENIC | |
| SBS | Chr7 | 5649785 | A-C | Homo | INTERGENIC | |
| SBS | Chr7 | 9861618 | G-C | Hetero | INTERGENIC | |
| SBS | Chr7 | 10668083 | C-G | Hetero | INTERGENIC | |
| SBS | Chr8 | 18842031 | G-A | Homo | INTERGENIC | |
| SBS | Chr8 | 29149193 | A-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 4409377 | G-A | Homo | INTERGENIC | |
| SBS | Chr10 | 19832665 | T-C | Hetero | INTERGENIC | |
| SBS | Chr10 | 21777677 | G-T | Hetero | INTERGENIC | |
| SBS | Chr11 | 12807423 | C-T | Homo | INTERGENIC | |
| SBS | Chr11 | 13419760 | G-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 25080250 | G-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 19309689 | C-T | Homo | INTERGENIC |
Deletions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr4 | 11570001 | 11605000 | 34999 | |
| Deletion | Chr2 | 14903758 | 14903759 | 1 | |
| Deletion | Chr9 | 16215066 | 16215068 | 2 | |
| Deletion | Chr1 | 26999096 | 26999100 | 4 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 14881151 | 14881154 | 2 | |
| Insertion | Chr2 | 17642860 | 17642863 | 2 | OsKitaake02g176900  |
| Insertion | Chr9 | 17141680 | 17141683 | 2 | |
| Insertion | Chr6 | 4888 | 4891 | 2 |
Inversions: 2
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr2 | 29727498 | 30047402 | 2 |
| Inversion | Chr2 | 29727503 | 30047405 | 2 |
Translocations: 3
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr7 | 19786750 | Chr3 | 28686726 | 2 |
| Translocation | Chr7 | 19787608 | Chr3 | 28686742 | 2 |
| Translocation | Chr8 | 28960613 | Chr1 | 30478260 |