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Mutant Information

Mutant Name	FN807-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN807-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 22

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 82156 G-T Homo INTERGENIC
SBS Chr1 19588771 C-T Homo INTERGENIC
SBS Chr1 28301636 C-G Homo INTERGENIC
SBS Chr1 35483156 G-A Homo INTRON
SBS Chr2 19750741 C-T Homo INTERGENIC
SBS Chr4 668279 G-A Hetero SYNONYMOUS_CODING
SBS Chr4 11007575 G-A Hetero INTERGENIC
SBS Chr4 16376919 C-T Hetero INTERGENIC
SBS Chr4 29364882 G-T Hetero SYNONYMOUS_CODING
SBS Chr5 980428 T-A Hetero INTERGENIC
SBS Chr6 8822932 C-T Hetero INTERGENIC
SBS Chr6 10996388 C-T Hetero NON_SYNONYMOUS_CODING OsKitaake06g122300
SBS Chr7 9611466 G-T Hetero INTERGENIC
SBS Chr7 25272946 A-T Hetero INTERGENIC
SBS Chr7 29201734 T-A Hetero INTERGENIC
SBS Chr8 3498612 C-A Hetero INTERGENIC
SBS Chr8 18045357 T-G Hetero NON_SYNONYMOUS_CODING OsKitaake08g134100
SBS Chr9 12385945 T-C Homo NON_SYNONYMOUS_CODING OsKitaake09g080900
SBS Chr10 5706917 G-A Homo INTERGENIC
SBS Chr10 20500132 T-G Hetero INTERGENIC
SBS Chr12 347621 A-G Hetero INTERGENIC
SBS Chr12 3729673 G-A Hetero UTR_5_PRIME

Deletions: 14

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr6 18326 18327 1
Deletion Chr10 246650 246652 2
Deletion Chr12 6903938 6903940 2
Deletion Chr7 7834546 7834549 3
Deletion Chr1 8116863 8116916 53
Deletion Chr9 12690277 12690283 6
Deletion Chr9 14918234 14918239 5 OsKitaake09g102600
Deletion Chr4 15663711 15663712 1
Deletion Chr3 16961447 16961448 1
Deletion Chr12 18339424 18339534 110
Deletion Chr3 20570843 20570848 5
Deletion Chr5 24646621 24646624 3
Deletion Chr5 26002087 26002095 8
Deletion Chr3 26640921 26640985 64

Insertions: 6

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr1 905603 905606 2
Insertion Chr3 14719437 14719440 2
Insertion Chr3 26819922 26819925 2
Insertion Chr4 9392696 9392699 2
Insertion Chr6 26228257 26228260 2
Insertion Chr8 10169073 10169076 2

Inversions: 2

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion Chr3 35918611 36880993
Inversion Chr3 35918612 36881005

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr9 17647896 Chr5 11461653
Translocation Chr9 17652427 Chr5 11461643

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	82156	G-T	Homo	INTERGENIC
SBS	Chr1	19588771	C-T	Homo	INTERGENIC
SBS	Chr1	28301636	C-G	Homo	INTERGENIC
SBS	Chr1	35483156	G-A	Homo	INTRON
SBS	Chr2	19750741	C-T	Homo	INTERGENIC
SBS	Chr4	668279	G-A	Hetero	SYNONYMOUS_CODING
SBS	Chr4	11007575	G-A	Hetero	INTERGENIC
SBS	Chr4	16376919	C-T	Hetero	INTERGENIC
SBS	Chr4	29364882	G-T	Hetero	SYNONYMOUS_CODING
SBS	Chr5	980428	T-A	Hetero	INTERGENIC
SBS	Chr6	8822932	C-T	Hetero	INTERGENIC
SBS	Chr6	10996388	C-T	Hetero	NON_SYNONYMOUS_CODING	OsKitaake06g122300
SBS	Chr7	9611466	G-T	Hetero	INTERGENIC
SBS	Chr7	25272946	A-T	Hetero	INTERGENIC
SBS	Chr7	29201734	T-A	Hetero	INTERGENIC
SBS	Chr8	3498612	C-A	Hetero	INTERGENIC
SBS	Chr8	18045357	T-G	Hetero	NON_SYNONYMOUS_CODING	OsKitaake08g134100
SBS	Chr9	12385945	T-C	Homo	NON_SYNONYMOUS_CODING	OsKitaake09g080900
SBS	Chr10	5706917	G-A	Homo	INTERGENIC
SBS	Chr10	20500132	T-G	Hetero	INTERGENIC
SBS	Chr12	347621	A-G	Hetero	INTERGENIC
SBS	Chr12	3729673	G-A	Hetero	UTR_5_PRIME

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr6	18326	18327	1
Deletion	Chr10	246650	246652	2
Deletion	Chr12	6903938	6903940	2
Deletion	Chr7	7834546	7834549	3
Deletion	Chr1	8116863	8116916	53
Deletion	Chr9	12690277	12690283	6
Deletion	Chr9	14918234	14918239	5	OsKitaake09g102600
Deletion	Chr4	15663711	15663712	1
Deletion	Chr3	16961447	16961448	1
Deletion	Chr12	18339424	18339534	110
Deletion	Chr3	20570843	20570848	5
Deletion	Chr5	24646621	24646624	3
Deletion	Chr5	26002087	26002095	8
Deletion	Chr3	26640921	26640985	64

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	35918611	36880993
Inversion	Chr3	35918612	36881005

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes