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Mutant Information

Mutant Name	FN811-S [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN811-S Alignment File
Seed Availability	Yes [Order Seeds]

Variant Information

Single base substitutions: 38

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS Chr1 18116100 C-T Homo INTERGENIC
SBS Chr1 18198338 G-T Homo INTERGENIC
SBS Chr1 20675625 C-T Homo UTR_3_PRIME
SBS Chr1 23949427 G-C Hetero INTERGENIC
SBS Chr1 25125945 T-C Hetero INTRON
SBS Chr1 30162144 C-T Hetero UTR_3_PRIME
SBS Chr1 30966172 C-A Hetero INTERGENIC
SBS Chr1 36642907 C-A Hetero INTRON
SBS Chr1 37269993 G-A Hetero INTERGENIC
SBS Chr1 39689608 G-T Hetero INTRON
SBS Chr3 5565474 G-A Hetero NON_SYNONYMOUS_CODING OsKitaake03g079200
SBS Chr4 14750064 G-T Hetero INTERGENIC
SBS Chr4 20613237 T-C Homo INTERGENIC
SBS Chr4 20618828 A-T Homo UTR_3_PRIME
SBS Chr4 20618829 A-T Homo UTR_3_PRIME
SBS Chr5 1282400 C-T Homo INTRON
SBS Chr6 5249728 G-A Homo INTERGENIC
SBS Chr6 5987761 A-G Hetero INTERGENIC
SBS Chr6 7565184 C-T Hetero INTERGENIC
SBS Chr6 7565185 C-T Hetero INTERGENIC
SBS Chr7 14426433 G-A Homo INTERGENIC
SBS Chr7 17583824 T-C Homo INTERGENIC
SBS Chr7 27213522 G-T Hetero INTERGENIC
SBS Chr8 12570123 C-T Homo INTERGENIC
SBS Chr8 14703838 C-G Hetero INTERGENIC
SBS Chr8 17956037 A-G Hetero INTRON
SBS Chr9 7665933 T-C Homo INTERGENIC
SBS Chr10 18327764 G-A Hetero INTERGENIC
SBS Chr11 1388673 T-A Hetero INTERGENIC
SBS Chr11 6586212 G-C Hetero INTERGENIC
SBS Chr11 13590020 G-A Hetero INTERGENIC
SBS Chr11 13682699 G-A Hetero INTERGENIC
SBS Chr11 15432489 A-G Hetero INTERGENIC
SBS Chr12 5076208 C-T Hetero INTERGENIC
SBS Chr12 9860332 G-T Hetero INTERGENIC
SBS Chr12 9900666 G-A Hetero INTERGENIC
SBS Chr12 10088646 C-G Hetero INTERGENIC
SBS Chr12 12980486 C-A Hetero INTERGENIC

Deletions: 11

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion Chr3 1256736 1256738 2
Deletion Chr10 1402783 1402800 17
Deletion Chr12 8216001 8275000 58999 3
Deletion Chr5 13870598 13870599 1
Deletion Chr9 19027914 19027916 2
Deletion Chr7 19342573 19342577 4
Deletion Chr1 22428956 22428958 2
Deletion Chr1 23965774 23965775 1
Deletion Chr2 26580290 26580298 8
Deletion Chr4 28155543 28155544 1
Deletion Chr4 36463062 36463065 3

Insertions: 4

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion Chr1 626257 626260 2
Insertion Chr4 13149334 13149337 2
Insertion Chr4 36263451 36263454 2
Insertion Chr9 15121259 15121262 2

Inversions: 2

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion Chr6 2177016 2573931 2
Inversion Chr6 2177057 2573963 OsKitaake06g027900

Translocations: 2

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation Chr2 11451890 Chr1 21037286
Translocation Chr2 11452155 Chr1 21037288

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18116100	C-T	Homo	INTERGENIC
SBS	Chr1	18198338	G-T	Homo	INTERGENIC
SBS	Chr1	20675625	C-T	Homo	UTR_3_PRIME
SBS	Chr1	23949427	G-C	Hetero	INTERGENIC
SBS	Chr1	25125945	T-C	Hetero	INTRON
SBS	Chr1	30162144	C-T	Hetero	UTR_3_PRIME
SBS	Chr1	30966172	C-A	Hetero	INTERGENIC
SBS	Chr1	36642907	C-A	Hetero	INTRON
SBS	Chr1	37269993	G-A	Hetero	INTERGENIC
SBS	Chr1	39689608	G-T	Hetero	INTRON
SBS	Chr3	5565474	G-A	Hetero	NON_SYNONYMOUS_CODING	OsKitaake03g079200
SBS	Chr4	14750064	G-T	Hetero	INTERGENIC
SBS	Chr4	20613237	T-C	Homo	INTERGENIC
SBS	Chr4	20618828	A-T	Homo	UTR_3_PRIME
SBS	Chr4	20618829	A-T	Homo	UTR_3_PRIME
SBS	Chr5	1282400	C-T	Homo	INTRON
SBS	Chr6	5249728	G-A	Homo	INTERGENIC
SBS	Chr6	5987761	A-G	Hetero	INTERGENIC
SBS	Chr6	7565184	C-T	Hetero	INTERGENIC
SBS	Chr6	7565185	C-T	Hetero	INTERGENIC
SBS	Chr7	14426433	G-A	Homo	INTERGENIC
SBS	Chr7	17583824	T-C	Homo	INTERGENIC
SBS	Chr7	27213522	G-T	Hetero	INTERGENIC
SBS	Chr8	12570123	C-T	Homo	INTERGENIC
SBS	Chr8	14703838	C-G	Hetero	INTERGENIC
SBS	Chr8	17956037	A-G	Hetero	INTRON
SBS	Chr9	7665933	T-C	Homo	INTERGENIC
SBS	Chr10	18327764	G-A	Hetero	INTERGENIC
SBS	Chr11	1388673	T-A	Hetero	INTERGENIC
SBS	Chr11	6586212	G-C	Hetero	INTERGENIC
SBS	Chr11	13590020	G-A	Hetero	INTERGENIC
SBS	Chr11	13682699	G-A	Hetero	INTERGENIC
SBS	Chr11	15432489	A-G	Hetero	INTERGENIC
SBS	Chr12	5076208	C-T	Hetero	INTERGENIC
SBS	Chr12	9860332	G-T	Hetero	INTERGENIC
SBS	Chr12	9900666	G-A	Hetero	INTERGENIC
SBS	Chr12	10088646	C-G	Hetero	INTERGENIC
SBS	Chr12	12980486	C-A	Hetero	INTERGENIC

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr3	1256736	1256738	2
Deletion	Chr10	1402783	1402800	17
Deletion	Chr12	8216001	8275000	58999	3
Deletion	Chr5	13870598	13870599	1
Deletion	Chr9	19027914	19027916	2
Deletion	Chr7	19342573	19342577	4
Deletion	Chr1	22428956	22428958	2
Deletion	Chr1	23965774	23965775	1
Deletion	Chr2	26580290	26580298	8
Deletion	Chr4	28155543	28155544	1
Deletion	Chr4	36463062	36463065	3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	2177016	2573931	2
Inversion	Chr6	2177057	2573963	OsKitaake06g027900

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Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes