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| Mutant Information |
|---|
| Mutant Name | FN813-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN813-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 26
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 4062769 | C-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 25056736 | C-T | Hetero | INTERGENIC | |
| SBS | Chr1 | 32567780 | C-A | Hetero | INTERGENIC | |
| SBS | Chr1 | 34242394 | C-T | Hetero | INTRON | |
| SBS | Chr2 | 4268404 | T-C | Hetero | INTERGENIC | |
| SBS | Chr2 | 14834749 | G-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 19911317 | C-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 36078835 | A-G | Hetero | INTERGENIC | |
| SBS | Chr6 | 4419357 | G-A | Hetero | INTRON | |
| SBS | Chr6 | 13472814 | C-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 21791704 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 13955352 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 4362576 | T-C | Hetero | INTERGENIC | |
| SBS | Chr8 | 7227361 | T-C | Hetero | NON_SYNONYMOUS_CODING | OsKitaake08g069621 |
| SBS | Chr8 | 26779858 | T-C | Hetero | INTERGENIC | |
| SBS | Chr9 | 1865190 | C-A | Homo | INTERGENIC | |
| SBS | Chr9 | 9728358 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 9997028 | C-T | Homo | INTERGENIC | |
| SBS | Chr10 | 3279299 | G-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 17991438 | C-A | Hetero | INTERGENIC | |
| SBS | Chr11 | 1218788 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 6608340 | G-A | Homo | INTERGENIC | |
| SBS | Chr12 | 2487206 | T-C | Hetero | INTERGENIC | |
| SBS | Chr12 | 4099477 | C-T | Homo | UTR_3_PRIME | |
| SBS | Chr12 | 14802732 | T-G | Homo | INTERGENIC | |
| SBS | Chr12 | 25631627 | A-T | Hetero | INTERGENIC |
Deletions: 13
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr4 | 440946 | 440948 | 2 | |
| Deletion | Chr11 | 1221554 | 1221562 | 8 | OsKitaake11g014600 |
| Deletion | Chr3 | 3659666 | 3659675 | 9 | |
| Deletion | Chr10 | 4713727 | 4713730 | 3 | |
| Deletion | Chr12 | 10855766 | 10855771 | 5 | |
| Deletion | Chr11 | 12310650 | 12310652 | 2 | |
| Deletion | Chr11 | 17092053 | 17092054 | 1 | |
| Deletion | Chr11 | 17224166 | 17224168 | 2 | |
| Deletion | Chr7 | 17270838 | 17270930 | 92 | |
| Deletion | Chr7 | 20549589 | 20549591 | 2 | |
| Deletion | Chr10 | 20984312 | 20984314 | 2 | |
| Deletion | Chr6 | 23646518 | 23646524 | 6 | |
| Deletion | Chr6 | 28586934 | 28586954 | 20 |
Insertions: 3
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr6 | 12911425 | 12911428 | 2 | |
| Insertion | Chr7 | 21303912 | 21303915 | 2 | |
| Insertion | Chr5 | 21767326 | 21767332 | 5 |
Translocations: 4
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr9 | 14545624 | Chr1 | 32475806 | OsKitaake01g328900 |
| Translocation | Chr9 | 14545638 | Chr1 | 32475534 | OsKitaake01g328900 |
| Translocation | Chr11 | 24602286 | Chr6 | 7792710 | |
| Translocation | Chr11 | 24602634 | Chr6 | 7792659 |