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| Mutant Information |
|---|
| Mutant Name | FN815-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN815-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 27
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 8976375 | A-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 18728948 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 18728949 | A-T | Homo | INTERGENIC | |
| SBS | Chr1 | 22412823 | G-A | Homo | INTERGENIC | |
| SBS | Chr1 | 27904115 | T-A | Hetero | INTERGENIC | |
| SBS | Chr2 | 26271539 | A-G | Hetero | INTERGENIC | |
| SBS | Chr3 | 22472264 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 8521959 | C-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 6116138 | G-A | Hetero | INTRON | |
| SBS | Chr6 | 8189060 | T-C | Hetero | INTRON | |
| SBS | Chr6 | 14791687 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 21944568 | G-A | Hetero | INTRON | |
| SBS | Chr6 | 25379747 | C-G | Hetero | INTERGENIC | |
| SBS | Chr6 | 26359102 | C-T | Hetero | INTERGENIC | |
| SBS | Chr8 | 3337309 | C-G | Homo | INTERGENIC | |
| SBS | Chr8 | 18210511 | A-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 11298198 | T-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 16235823 | C-A | Hetero | INTRON | |
| SBS | Chr9 | 17355862 | G-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 18413141 | T-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 23880833 | C-G | Homo | INTRON | |
| SBS | Chr11 | 5213512 | C-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 14668974 | G-A | Homo | INTERGENIC | |
| SBS | Chr12 | 21966557 | T-C | Hetero | INTRON | |
| SBS | Chr12 | 23699235 | G-T | Homo | INTERGENIC | |
| SBS | Chr12 | 23699236 | C-T | Homo | INTERGENIC | |
| SBS | Chr12 | 25940658 | T-C | Hetero | INTERGENIC |
Deletions: 19
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr6 | 7105 | 7456 | 351 | |
| Deletion | Chr9 | 975837 | 975839 | 2 | |
| Deletion | Chr5 | 1731930 | 1731931 | 1 | OsKitaake05g020200 |
| Deletion | Chr11 | 2827030 | 2827034 | 4 | |
| Deletion | Chr5 | 4674001 | 4813000 | 138999 | 6 |
| Deletion | Chr5 | 6967653 | 6967662 | 9 | |
| Deletion | Chr1 | 11434502 | 11434503 | 1 | |
| Deletion | Chr6 | 19266826 | 19266827 | 1 | |
| Deletion | Chr10 | 19397937 | 19397939 | 2 | OsKitaake10g141400 |
| Deletion | Chr4 | 19984441 | 19984444 | 3 | |
| Deletion | Chr3 | 21330001 | 21352000 | 21999 | 2 |
| Deletion | Chr4 | 21333385 | 21333394 | 9 | |
| Deletion | Chr12 | 23256620 | 23256628 | 8 | |
| Deletion | Chr6 | 27707930 | 27707939 | 9 | OsKitaake06g251000 |
| Deletion | Chr4 | 28112997 | 28113013 | 16 | |
| Deletion | Chr4 | 29470751 | 29470753 | 2 | |
| Deletion | Chr5 | 30223346 | 30223347 | 1 | |
| Deletion | Chr1 | 32373894 | 32373895 | 1 | OsKitaake01g327100 |
| Deletion | Chr3 | 36560941 | 36560946 | 5 | OsKitaake03g406800 |
Translocations: 3
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr5 | 9645305 | Chr2 | 31622706 | OsKitaake02g321880 |
| Translocation | Chr6 | 27417007 | Chr5 | 18757004 | OsKitaake06g247500 |
| Translocation | Chr6 | 27417468 | Chr5 | 18757003 | OsKitaake06g247500 |