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| Mutant Information |
|---|
| Mutant Name | FN855-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN855-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 17
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 843735 | G-T | Homo | INTERGENIC | |
| SBS | Chr1 | 1298276 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 7789515 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 27288440 | G-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake02g274100 |
| SBS | Chr3 | 10705410 | G-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 29482791 | C-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 1606536 | G-A | Homo | INTERGENIC | |
| SBS | Chr4 | 23012830 | T-A | Homo | INTERGENIC | |
| SBS | Chr5 | 6849696 | T-A | Hetero | INTERGENIC | |
| SBS | Chr6 | 19921812 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 7687405 | C-T | Homo | INTERGENIC | |
| SBS | Chr9 | 13097451 | C-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 14297599 | G-T | Hetero | INTERGENIC | |
| SBS | Chr10 | 2620482 | G-A | Hetero | INTRON | |
| SBS | Chr11 | 29236521 | T-A | Homo | INTERGENIC | |
| SBS | Chr12 | 17520973 | C-A | Hetero | INTRON | |
| SBS | Chr12 | 24259272 | C-T | Homo | NON_SYNONYMOUS_CODING | OsKitaake12g195200 |
Deletions: 9
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr8 | 6064065 | 6064067 | 2 | |
| Deletion | Chr2 | 7363596 | 7363600 | 4 | |
| Deletion | Chr12 | 9611428 | 9611429 | 1 | |
| Deletion | Chr6 | 12643066 | 12643067 | 1 | |
| Deletion | Chr1 | 18427202 | 18427206 | 4 | OsKitaake01g185000 |
| Deletion | Chr11 | 19203538 | 19203539 | 1 | |
| Deletion | Chr11 | 20670448 | 20670449 | 1 | |
| Deletion | Chr11 | 27239264 | 27239269 | 5 | |
| Deletion | Chr4 | 30324057 | 30324058 | 1 |
Insertions: 2
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr8 | 22979661 | 22979664 | 2 | |
| Insertion | Chr2 | 13854529 | 13854531 | 1 |