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| Mutant Information |
|---|
| Mutant Name | FN922-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN922-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 23
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 5637566 | G-A | Homo | INTERGENIC | |
| SBS | Chr1 | 13065241 | G-T | Hetero | INTERGENIC | |
| SBS | Chr2 | 4489570 | T-A | Homo | INTERGENIC | |
| SBS | Chr2 | 4489571 | T-A | Homo | INTERGENIC | |
| SBS | Chr2 | 30379735 | C-T | Homo | UTR_3_PRIME | |
| SBS | Chr4 | 6930029 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 13648104 | G-A | Hetero | INTERGENIC | |
| SBS | Chr4 | 13662255 | C-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 13319402 | T-C | Homo | INTERGENIC | |
| SBS | Chr5 | 24064974 | G-C | Hetero | INTERGENIC | |
| SBS | Chr6 | 19098235 | C-T | Homo | INTERGENIC | |
| SBS | Chr6 | 19098236 | T-A | Homo | INTERGENIC | |
| SBS | Chr8 | 16735889 | A-T | Hetero | INTERGENIC | |
| SBS | Chr9 | 14583252 | T-A | Homo | INTERGENIC | |
| SBS | Chr9 | 15835766 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 15862435 | C-A | Hetero | INTERGENIC | |
| SBS | Chr10 | 7234263 | T-A | Homo | INTERGENIC | |
| SBS | Chr10 | 12513233 | C-T | Homo | INTERGENIC | |
| SBS | Chr10 | 18979807 | C-T | Hetero | NON_SYNONYMOUS_CODING | OsKitaake10g135500 |
| SBS | Chr10 | 22636703 | G-C | Hetero | NON_SYNONYMOUS_CODING | OsKitaake10g187300 |
| SBS | Chr10 | 23383942 | T-C | Hetero | INTERGENIC | |
| SBS | Chr11 | 17551627 | T-G | Hetero | INTERGENIC | |
| SBS | Chr12 | 10313101 | A-G | Hetero | UTR_5_PRIME |
Deletions: 17
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr10 | 343775 | 343777 | 2 | |
| Deletion | Chr5 | 904494 | 904495 | 1 | |
| Deletion | Chr4 | 3095001 | 3122000 | 26999 | 2 |
| Deletion | Chr5 | 3798968 | 3798973 | 5 | |
| Deletion | Chr2 | 4081056 | 4081058 | 2 | |
| Deletion | Chr5 | 5893760 | 5893848 | 88 | |
| Deletion | Chr11 | 5973788 | 5973808 | 20 | |
| Deletion | Chr8 | 12352613 | 12352614 | 1 | |
| Deletion | Chr8 | 12395547 | 12395554 | 7 | |
| Deletion | Chr6 | 12956967 | 12956970 | 3 | |
| Deletion | Chr9 | 15534931 | 15534936 | 5 | |
| Deletion | Chr2 | 19360248 | 19360260 | 12 | |
| Deletion | Chr12 | 19795001 | 19867000 | 71999 | OsKitaake12g148200 |
| Deletion | Chr12 | 21363001 | 21447000 | 83999 | 6 |
| Deletion | Chr11 | 22088107 | 22088114 | 7 | |
| Deletion | Chr6 | 29222289 | 29222291 | 2 | |
| Deletion | Chr4 | 35422834 | 35422836 | 2 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr1 | 25112563 | 25112566 | 2 | |
| Insertion | Chr3 | 25917710 | 25917713 | 2 | |
| Insertion | Chr7 | 20999508 | 20999511 | 2 | |
| Insertion | Chr11 | 29544587 | 29544592 | 4 |
Inversions: 3
Variant Type |
Chromosome |
Position 1 |
Position 2 |
Number of Genes |
| Inversion | Chr12 | 10656636 | 11418743 | OsKitaake12g099200 |
| Inversion | Chr12 | 10656708 | 11419130 | OsKitaake12g099200 |
| Inversion | Chr1 | 13257854 | 13291504 |
Translocations: 4
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
| Translocation | Chr5 | 4410758 | Chr3 | 13261376 | OsKitaake05g051200 |
| Translocation | Chr5 | 4410766 | Chr3 | 13261374 | OsKitaake05g051200 |
| Translocation | Chr11 | 13248841 | Chr7 | 11273999 | |
| Translocation | Chr11 | 13248863 | Chr7 | 11273160 |