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| Mutant Information |
|---|
| Mutant Name | FN931-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN931-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 41
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
| SBS | Chr1 | 1876216 | T-G | Hetero | INTERGENIC | |
| SBS | Chr1 | 14354867 | G-A | Homo | INTERGENIC | |
| SBS | Chr1 | 17353140 | C-T | Homo | INTERGENIC | |
| SBS | Chr1 | 21639155 | T-C | Homo | INTERGENIC | |
| SBS | Chr1 | 21639157 | T-A | Homo | INTERGENIC | |
| SBS | Chr1 | 22378038 | G-A | Homo | INTRON | |
| SBS | Chr2 | 16245902 | G-C | Homo | INTRON | |
| SBS | Chr2 | 35172270 | C-T | Homo | UTR_5_PRIME | |
| SBS | Chr3 | 17420913 | A-G | Hetero | INTERGENIC | |
| SBS | Chr3 | 19546382 | A-T | Hetero | INTERGENIC | |
| SBS | Chr3 | 22144729 | G-A | Homo | INTERGENIC | |
| SBS | Chr3 | 23416385 | T-C | Hetero | UTR_3_PRIME | |
| SBS | Chr3 | 28893900 | A-G | Homo | INTERGENIC | |
| SBS | Chr3 | 32379414 | G-A | Homo | UTR_3_PRIME | |
| SBS | Chr4 | 4358230 | G-T | Hetero | INTERGENIC | |
| SBS | Chr4 | 6889468 | C-T | Homo | INTERGENIC | |
| SBS | Chr4 | 16623022 | C-G | Hetero | INTERGENIC | |
| SBS | Chr4 | 34769437 | T-C | Hetero | INTERGENIC | |
| SBS | Chr5 | 6341655 | C-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 9316963 | A-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 9316964 | A-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 9746157 | C-A | Hetero | INTERGENIC | |
| SBS | Chr5 | 12260230 | C-T | Hetero | INTERGENIC | |
| SBS | Chr5 | 15555294 | G-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 13800244 | C-T | Hetero | INTERGENIC | |
| SBS | Chr6 | 25165506 | G-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 4282306 | T-A | Hetero | INTERGENIC | |
| SBS | Chr7 | 19405452 | C-T | Homo | INTERGENIC | |
| SBS | Chr7 | 19405453 | C-T | Homo | INTERGENIC | |
| SBS | Chr8 | 2718143 | T-C | Homo | INTERGENIC | |
| SBS | Chr8 | 4063529 | G-A | Homo | INTRON | |
| SBS | Chr8 | 22192055 | A-G | Hetero | INTERGENIC | |
| SBS | Chr9 | 4172313 | C-T | Homo | INTERGENIC | |
| SBS | Chr9 | 13195047 | G-A | Hetero | INTERGENIC | |
| SBS | Chr9 | 17258361 | C-G | Hetero | INTERGENIC | |
| SBS | Chr10 | 12881526 | C-G | Homo | INTERGENIC | |
| SBS | Chr10 | 13443282 | G-T | Homo | INTRON | |
| SBS | Chr11 | 18861375 | G-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 849557 | C-A | Hetero | INTERGENIC | |
| SBS | Chr12 | 12742598 | C-T | Hetero | INTERGENIC | |
| SBS | Chr12 | 18526570 | T-C | Hetero | UTR_3_PRIME |
Deletions: 9
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Deletion | Chr9 | 2746399 | 2746719 | 320 | |
| Deletion | Chr7 | 3713398 | 3713401 | 3 | |
| Deletion | Chr8 | 4399367 | 4399376 | 9 | |
| Deletion | Chr6 | 16021001 | 16073000 | 51999 | 6 |
| Deletion | Chr10 | 22084770 | 22084777 | 7 | |
| Deletion | Chr8 | 23179485 | 23179595 | 110 | |
| Deletion | Chr4 | 26473793 | 26473797 | 4 | |
| Deletion | Chr1 | 29157617 | 29157621 | 4 | OsKitaake01g283700 |
| Deletion | Chr3 | 32615650 | 32615652 | 2 |
Insertions: 4
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
| Insertion | Chr5 | 29461455 | 29461458 | 2 | |
| Insertion | Chr10 | 16813093 | 16813096 | 2 | |
| Insertion | Chr11 | 21917824 | 21917826 | 1 | |
| Insertion | Chr5 | 16011110 | 16011112 | 1 |