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Mutant Information 

Mutant NameFN984-S  [Download]
Generation M2
Genus Species Oryza Sativa
Cultivar Kitaake
Alignment File (BAM File) Download FN984-S Alignment File
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Position

Change

Genotype

Effect

Gene Affected

SBS  Chr13724734A-THomoINTRON
SBS  Chr111624972A-CHeteroINTERGENIC
SBS  Chr118713002T-AHomoINTRON
SBS  Chr128576119C-THeteroINTRON
SBS  Chr24911740T-GHeteroINTERGENIC
SBS  Chr211264211G-AHeteroINTERGENIC
SBS  Chr216396069G-AHeteroINTRON
SBS  Chr221533581C-THomoINTRON
SBS  Chr221816427G-THomoINTERGENIC
SBS  Chr222324527G-THomoNON_SYNONYMOUS_CODINGOsKitaake02g216000
SBS  Chr223466301G-THeteroINTERGENIC
SBS  Chr226623755A-THomoINTERGENIC
SBS  Chr38701674G-CHomoINTRON
SBS  Chr319268380C-AHeteroINTERGENIC
SBS  Chr329311439C-THeteroINTERGENIC
SBS  Chr330542092A-GHeteroINTERGENIC
SBS  Chr43524841G-AHeteroINTERGENIC
SBS  Chr48832677C-THeteroINTERGENIC
SBS  Chr411620544G-AHeteroINTERGENIC
SBS  Chr416687864A-THeteroINTERGENIC
SBS  Chr417127295C-THeteroINTERGENIC
SBS  Chr62663243C-THeteroINTERGENIC
SBS  Chr67129533A-THeteroINTERGENIC
SBS  Chr611879472C-THeteroINTERGENIC
SBS  Chr624067693A-GHeteroINTERGENIC
SBS  Chr71313929A-THeteroINTRON
SBS  Chr76968576C-THeteroINTERGENIC
SBS  Chr83076153A-CHomoINTERGENIC
SBS  Chr911249656A-GHomoINTERGENIC
SBS  Chr109640302A-THeteroINTERGENIC
SBS  Chr1019002258C-THomoINTERGENIC
SBS  Chr1119276685C-AHeteroINTRON
SBS  Chr129677225G-CHomoINTERGENIC

Deletions: 16

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Deletion  Chr66277163478707
Deletion  Chr5169280716928103
Deletion  Chr10402259040225944
Deletion  Chr12648076964807767
Deletion  Chr1747546274754697
Deletion  Chr712340679123406801
Deletion  Chr313143777131437869
Deletion  Chr414385259143852601
Deletion  Chr514564830145648333
Deletion  Chr816041008160410146
Deletion  Chr816069604160696128
Deletion  Chr118521241185212454
Deletion  Chr718906381189063832
Deletion  Chr120648981206489865OsKitaake01g201900
Deletion  Chr722092085220920861
Deletion  Chr231763001317720008999

Insertions: 1

Variant Type

Chromosome

Start

End

Size(bp)

Number of Genes

Insertion  Chr530239995302400037

Inversions: 2

Variant Type

Chromosome

Position 1

Position 2

Number of Genes

Inversion  Chr21405864214232420OsKitaake02g152600
Inversion  Chr62078823220811467OsKitaake06g185900

Translocations: 3

Variant Type

Chromosome

Position 1

Chromosome

Position 2

Number of Genes

Translocation  Chr97057474Chr620788246
Translocation  Chr97057482Chr620788679
Translocation  Chr920018487Chr816443197