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Mutant Information

Mutant Name	FN_N1-151-1 [Download]
Generation	M3
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download FN_N1-151-1 Alignment File
Seed Availability	No

Variant Information

Single base substitutions: 12

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	23836818	C-T	Hetero	INTERGENIC
SBS	Chr1	25107307	C-A	Hetero	INTRON
SBS	Chr2	1123063	G-C	Hetero	INTERGENIC
SBS	Chr2	16646212	T-G	Hetero	INTERGENIC
SBS	Chr2	25136576	C-G	Homo	INTERGENIC
SBS	Chr3	2286618	G-C	Hetero	INTERGENIC
SBS	Chr3	13542179	C-T	Hetero	INTERGENIC
SBS	Chr3	18117610	G-T	Hetero	INTRON
SBS	Chr6	1720216	G-T	Hetero	INTERGENIC
SBS	Chr6	13859417	T-C	Hetero	INTERGENIC
SBS	Chr9	21971637	C-G	Hetero	INTRON
SBS	Chr10	3626919	G-A	Hetero	INTERGENIC

Deletions: 5

Variant Type	Chromosome	Start	End	Size(bp)	Number of Genes
Deletion	Chr2	7546671	7546679	8
Deletion	Chr6	7793675	7793677	2
Deletion	Chr10	9633001	9702000	68999	6
Deletion	Chr1	11289317	11289319	2
Deletion	Chr11	29645001	29734000	88999	10

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	11831661	Chr2	15556880