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Mutant Information |
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Mutant Name | FN_N1-151-7 [Download] |
Generation | M3 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN_N1-151-7 Alignment File |
Seed Availability | No |
Variant Information |
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Single base substitutions: 19
Variant Type |
Chromosome |
Position |
Change |
Genotype |
Effect |
Gene Affected |
SBS | Chr1 | 18373313 | C-T | Homo | INTERGENIC | |
SBS | Chr1 | 43469148 | T-A | Hetero | INTRON | |
SBS | Chr2 | 15688351 | C-T | Hetero | INTERGENIC | |
SBS | Chr3 | 7006228 | G-A | Hetero | INTERGENIC | |
SBS | Chr4 | 215297 | T-C | Hetero | INTERGENIC | |
SBS | Chr4 | 9098352 | T-G | Homo | INTERGENIC | |
SBS | Chr4 | 18965439 | A-G | Homo | INTERGENIC | |
SBS | Chr5 | 429897 | G-A | Hetero | INTERGENIC | |
SBS | Chr7 | 20689651 | G-A | Hetero | INTRON | |
SBS | Chr8 | 2710652 | T-C | Hetero | INTERGENIC | |
SBS | Chr8 | 14741022 | C-T | Hetero | INTERGENIC | |
SBS | Chr8 | 16173370 | G-C | Hetero | INTERGENIC | |
SBS | Chr8 | 18791393 | G-A | Hetero | INTERGENIC | |
SBS | Chr8 | 19576211 | C-T | Hetero | INTERGENIC | |
SBS | Chr9 | 3963727 | T-C | Hetero | INTERGENIC | |
SBS | Chr11 | 20430153 | G-C | Hetero | INTERGENIC | |
SBS | Chr11 | 20800616 | G-A | Hetero | INTERGENIC | |
SBS | Chr12 | 23328006 | G-A | Hetero | INTERGENIC | |
SBS | Chr12 | 23686573 | G-A | Hetero | INTERGENIC |
Deletions: 3
Variant Type |
Chromosome |
Start |
End |
Size(bp) |
Number of Genes |
Deletion | Chr10 | 9637001 | 9702000 | 64999 | 6 |
Deletion | Chr4 | 11568291 | 11568304 | 13 | |
Deletion | Chr11 | 29648001 | 29732000 | 83999 | 9 |
Translocations: 2
Variant Type |
Chromosome |
Position 1 |
Chromosome |
Position 2 |
Number of Genes |
Translocation | Chr10 | 9634478 | Chr9 | 2543206 | OsKitaake09g013900 |
Translocation | Chr10 | 9702054 | Chr9 | 2543189 | OsKitaake09g013900 |