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Mutant Information

Mutant Name	703-2 [Download]
Generation	M2
Genus Species	Oryza Sativa
Cultivar	Kitaake
Alignment File (BAM File)	Download 703-2 Alignment File
Seed Availability	Yes [Order Seeds]
Mapping (Hover to Zoom-In)

Variant Information

Single base substitutions: 4

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	19384947	A-T	Homo	INTERGENIC
SBS	Chr4	15078601	A-G	Homo	INTERGENIC
SBS	Chr5	12149542	G-A	Homo	INTERGENIC
SBS	Chr8	25852501	G-A	Homo	INTRON

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	79371	79381	10	LOC_Os05g01060
Deletion	Chr11	3767794	3767799	5
Deletion	Chr9	3769348	3769349	1
Deletion	Chr6	5863090	5863092	2
Deletion	Chr9	7925001	7973000	48000	4
Deletion	Chr9	8279001	8318000	39000	4
Deletion	Chr10	9266001	9315000	49000	5
Deletion	Chr9	10076111	10076118	7
Deletion	Chr3	15695148	15695158	10
Deletion	Chr11	16988191	16988197	6
Deletion	Chr2	19021080	19021081	1
Deletion	Chr2	20249001	20323000	74000	5
Deletion	Chr2	24858001	24858004	3
Deletion	Chr5	28876963	28876968	5	LOC_Os05g50380
Deletion	Chr1	40154943	40154945	2

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	31933016	31933016	1	LOC_Os02g52170
Insertion	Chr8	19094576	19094576	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	8933978	9726391	LOC_Os10g19100
Inversion	Chr10	9120367	9266080
Inversion	Chr10	9120383	9726402	LOC_Os10g19100

No Translocation