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Mutant Information

Mutant Name704-4-3 [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download 704-4-3 Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 6
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr1012664659C-THomoINTERGENIC
SBSChr1114894290G-AHomoINTERGENIC
SBSChr1114894291G-AHomoINTERGENIC
SBSChr126629708C-AHomoINTERGENIC
SBSChr79889321A-THomoINTERGENIC
SBSChr919960056G-AHomoINTERGENIC

Deletions: 15
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr34714896471490812
DeletionChr95281833528186936LOC_Os09g09760
DeletionChr118925001905700013200017
DeletionChr810873325108733261
DeletionChr111607856116078593
DeletionChr1222066178220661813
DeletionChr822201140222011411
DeletionChr22358400223584492490
DeletionChr723752211237522121
DeletionChr326073765260737683LOC_Os03g46110
DeletionChr8272873972728744851
DeletionChr227351425273514272
DeletionChr129476312294763164
DeletionChr432855006328550126
DeletionChr133747840337478422

Insertions: 6
Variant Type Chromosome Start End Size (bp) Number of Genes
InsertionChr120834624208346274
InsertionChr1125200701252007011
InsertionChr1224678974246789752
InsertionChr513023477130234793
InsertionChr52685862685861
InsertionChr528424124284241241

Inversions: 5
Variant Type Chromosome Position 1 Position 2 Number of Genes
InversionChr10435794452694942
InversionChr1051556415269489LOC_Os10g09740
InversionChr1051579075233725LOC_Os10g09550
InversionChr1052127265233726
InversionChr813866810166288622

Translocations: 4
Variant Type Chromosome Position 1 Chromosome Position 2 Number of Genes
TranslocationChr124132491Chr119057147LOC_Os11g16390
TranslocationChr1015983598Chr96740610
TranslocationChr816628790Chr365689522
TranslocationChr1223626310Chr223584484