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Mutant Information

Variant Information

Single base substitutions: 11

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10195937	A-G	Homo	INTRON
SBS	Chr1	17833819	G-T	Homo	INTERGENIC
SBS	Chr12	24971215	G-A	HET	INTERGENIC
SBS	Chr2	5251996	C-A	Homo	INTRON
SBS	Chr5	15195888	C-A	Homo	INTERGENIC
SBS	Chr6	10820617	G-A	Homo	INTERGENIC
SBS	Chr6	20626839	G-T	HET	SYNONYMOUS_CODING
SBS	Chr8	10347968	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g16900
SBS	Chr8	11702234	G-A	HET	INTERGENIC
SBS	Chr8	3016974	T-C	Homo	INTERGENIC
SBS	Chr9	14925676	C-T	HET	INTRON

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1271990	1272006	16
Deletion	Chr5	2733827	2733828	1
Deletion	Chr3	4624126	4624134	8
Deletion	Chr1	7379139	7379145	6
Deletion	Chr12	8162672	8162674	2	LOC_Os12g14330
Deletion	Chr1	8174082	8174084	2	LOC_Os01g14580
Deletion	Chr1	8331951	8331963	12	LOC_Os01g14860
Deletion	Chr3	10178376	10178377	1
Deletion	Chr1	10186190	10186195	5	LOC_Os01g18200
Deletion	Chr4	10311554	10311583	29
Deletion	Chr11	12722549	12722557	8	LOC_Os11g22170
Deletion	Chr6	13357178	13357182	4
Deletion	Chr2	16056136	16056145	9
Deletion	Chr3	17910464	17910468	4
Deletion	Chr8	18929383	18929396	13
Deletion	Chr4	19936565	19936568	3
Deletion	Chr4	23869799	23869837	38	LOC_Os04g40090
Deletion	Chr5	23911088	23911089	1
Deletion	Chr3	26461919	26461921	2
Deletion	Chr5	27536454	27536455	1
Deletion	Chr4	28014703	28014714	11
Deletion	Chr2	31736646	31736653	7
Deletion	Chr1	35523399	35523406	7

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	7993569	7993569	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	23951725	24129638	LOC_Os12g38950

No Translocation

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