Search Results

Mutant Information

Variant Information

Single base substitutions: 11

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	28160300	G-A	Homo	INTERGENIC
SBS	Chr1	10195937	A-G	Homo	INTRON
SBS	Chr1	17833819	G-T	Homo	INTERGENIC
SBS	Chr6	10116809	A-G	Homo	INTERGENIC
SBS	Chr6	28806578	G-T	Homo	INTERGENIC
SBS	Chr6	28853820	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g47650
SBS	Chr7	29129031	A-T	HET	INTERGENIC
SBS	Chr7	29448587	A-G	HET	INTRON
SBS	Chr8	10347968	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g16900
SBS	Chr8	11702234	G-A	Homo	INTERGENIC
SBS	Chr9	14925676	C-T	Homo	INTRON

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	843525	843526	1
Deletion	Chr4	2112377	2112391	14	LOC_Os04g04430
Deletion	Chr5	2733827	2733828	1
Deletion	Chr9	6386192	6386198	6
Deletion	Chr1	7379139	7379145	6
Deletion	Chr8	7815887	7815898	11
Deletion	Chr1	8174082	8174084	2	LOC_Os01g14580
Deletion	Chr1	8331951	8331963	12	LOC_Os01g14860
Deletion	Chr6	10107826	10107838	12
Deletion	Chr3	10178376	10178377	1
Deletion	Chr11	12722549	12722557	8	LOC_Os11g22170
Deletion	Chr2	16056136	16056145	9
Deletion	Chr12	16915001	17120000	205000	33
Deletion	Chr8	18929383	18929396	13
Deletion	Chr4	22149134	22149139	5
Deletion	Chr4	23869799	23869837	38	LOC_Os04g40090
Deletion	Chr5	23911088	23911089	1
Deletion	Chr3	24667055	24667061	6
Deletion	Chr8	26985306	26985307	1
Deletion	Chr6	27023683	27023685	2
Deletion	Chr5	27536454	27536455	1
Deletion	Chr4	28014703	28014714	11
Deletion	Chr2	31736646	31736653	7
Deletion	Chr3	32136577	32136592	15
Deletion	Chr1	35523399	35523406	7

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	23659236	23659236	1
Insertion	Chr10	7991019	7991019	1
Insertion	Chr5	7993569	7993569	1
Insertion	Chr6	28806570	28806570	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	6697854	6878358	LOC_Os06g12360

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	23951741	Chr6	3364701	2
Translocation	Chr12	23953862	Chr6	3364705	2

Main menu