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Mutant Information

Variant Information

Single base substitutions: 9

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	23658613	A-T	Homo	INTRON
SBS	Chr4	1574571	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g03600
SBS	Chr5	20541202	A-T	Homo	INTERGENIC
SBS	Chr5	21322554	T-A	Homo	INTERGENIC
SBS	Chr3	8302350	A-T	Homo	INTRON
SBS	Chr5	8664270	C-T	Homo	INTERGENIC
SBS	Chr12	24234864	G-A	Homo	INTERGENIC
SBS	Chr12	24618155	C-A	Homo	INTERGENIC
SBS	Chr12	24618159	G-T	Homo	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	686597	686598	1
Deletion	Chr11	2363633	2363645	12
Deletion	Chr3	2810583	2810584	1
Deletion	Chr11	2944352	2945175	823
Deletion	Chr2	5933816	5933817	1
Deletion	Chr2	6032912	6032913	1
Deletion	Chr1	6980665	6980690	25	LOC_Os01g12670
Deletion	Chr3	7668984	7668987	3
Deletion	Chr5	9299001	9299009	8
Deletion	Chr8	9887246	9887247	1
Deletion	Chr10	11054204	11054206	2	LOC_Os10g21590
Deletion	Chr1	13923211	13923216	5
Deletion	Chr5	20772086	20772087	1
Deletion	Chr7	22315276	22315303	27
Deletion	Chr8	23910215	23910218	3
Deletion	Chr11	24287834	24287842	8
Deletion	Chr12	24716432	24716435	3	LOC_Os12g39980
Deletion	Chr1	25538841	25538846	5	LOC_Os01g45010
Deletion	Chr1	29274842	29274846	4
Deletion	Chr3	30542658	30542661	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	17808900	17808913	14	LOC_Os02g29960
Insertion	Chr12	19503149	19503150	2
Insertion	Chr8	484865	484865	1
Insertion	Chr8	15992326	15992326	1

No Inversion

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	28178294	Chr2	18445011	LOC_Os08g44860

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