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Mutant Information

Variant Information

Single base substitutions: 3

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	5104302	T-C	Homo	INTRON
SBS	Chr1	6534939	C-A	HET	SYNONYMOUS_CODING
SBS	Chr8	22283208	G-A	HET	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	792596	792604	8
Deletion	Chr11	2952512	2952513	1
Deletion	Chr6	3921522	3923940	2418	LOC_Os06g08080
Deletion	Chr3	8887846	8887866	20	LOC_Os03g16110
Deletion	Chr3	11251221	11251269	48
Deletion	Chr2	13182280	13182285	5
Deletion	Chr11	14686001	14798000	112000	19
Deletion	Chr1	16086123	16086150	27
Deletion	Chr1	16353629	16353632	3
Deletion	Chr3	17006033	17006051	18
Deletion	Chr7	17171876	17171901	25
Deletion	Chr11	21658293	21658336	43
Deletion	Chr6	21714196	21714214	18
Deletion	Chr1	21987267	21987270	3
Deletion	Chr10	22149796	22149810	14
Deletion	Chr3	22546504	22546505	1
Deletion	Chr8	25023751	25023755	4
Deletion	Chr11	26046001	26059000	13000	3
Deletion	Chr5	26616270	26616271	1
Deletion	Chr1	37795126	37795129	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	10767528	10767529	2
Insertion	Chr11	13787528	13787528	1
Insertion	Chr2	22592803	22592803	1
Insertion	Chr2	29322256	29322256	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	4518064	13735009	2
Inversion	Chr11	4518797	13668328	LOC_Os11g08550
Inversion	Chr11	14686545	14853063	LOC_Os11g25750
Inversion	Chr11	14798085	14853078
Inversion	Chr11	24899045	26059084	LOC_Os11g41510

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	26043711	Chr10	1079055	LOC_Os10g02740
Translocation	Chr11	26046077	Chr10	1079061	LOC_Os10g02740

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