Search Results

Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12333026	C-T	HET	UTR_3_PRIME
SBS	Chr1	22755437	A-C	HET	UTR_5_PRIME
SBS	Chr1	23986524	C-T	HET	INTERGENIC
SBS	Chr1	33440705	T-G	HET	INTERGENIC
SBS	Chr1	36633408	C-T	HET	INTERGENIC
SBS	Chr2	14819694	T-C	HET	INTERGENIC
SBS	Chr2	18650638	T-A	HOMO	INTRON
SBS	Chr2	28833446	G-A	HET	UTR_5_PRIME
SBS	Chr2	33193726	G-A	HET	SYNONYMOUS_CODING
SBS	Chr3	2781255	G-A	HET	INTERGENIC
SBS	Chr3	9466602	C-A	HET	INTERGENIC
SBS	Chr3	29948832	C-T	HET	INTERGENIC
SBS	Chr4	12747430	C-T	HET	INTERGENIC
SBS	Chr5	19150984	A-G	HOMO	INTRON
SBS	Chr5	23348767	G-C	HOMO	SYNONYMOUS_CODING
SBS	Chr5	29040113	C-T	HET	INTRON
SBS	Chr6	1814137	T-A	HOMO	INTERGENIC
SBS	Chr7	14337240	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g25100
SBS	Chr8	10710137	A-T	HOMO	INTERGENIC
SBS	Chr8	20365134	A-T	HOMO	INTRON
SBS	Chr9	10154282	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g16540
SBS	Chr10	2047711	C-G	HET	INTRON
SBS	Chr10	12407415	C-T	HOMO	INTERGENIC
SBS	Chr10	13155865	G-A	HET	INTERGENIC
SBS	Chr12	12219729	G-A	HOMO	INTRON

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	3279140	3279143	3	LOC_Os11g06720
Deletion	Chr7	6606199	6606200	1
Deletion	Chr3	12545786	12545805	19
Deletion	Chr3	16142829	16142840	11
Deletion	Chr5	16852794	16852795	1
Deletion	Chr5	17874736	17874743	7
Deletion	Chr6	19779675	19779678	3
Deletion	Chr5	21191765	21191937	172
Deletion	Chr9	22236227	22236235	8
Deletion	Chr11	22738124	22738129	5
Deletion	Chr2	25937001	25974000	37000	7
Deletion	Chr6	26838830	26838838	8
Deletion	Chr5	29046274	29046303	29	LOC_Os05g50660
Deletion	Chr3	31006389	31006393	4	LOC_Os03g54084
Deletion	Chr4	32234001	32247000	13000	4
Deletion	Chr2	34942405	34942414	9	LOC_Os02g57070

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr5	19586896	19586896	1
Insertion	Chr3	7388158	7388159	2
Insertion	Chr7	4124573	4124574	2
Insertion	Chr9	9495466	9495467	2
Insertion	Chr10	15545794	15545794	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	13365365	13469370	LOC_Os03g23110
Inversion	Chr8	26378950	26478393
Inversion	Chr4	30924677	31071998	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	21334241	Chr8	16879884	LOC_Os12g35060
Translocation	Chr12	21334273	Chr8	16878302	LOC_Os12g35060

Main menu