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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10353175	G-A	HOMO	INTERGENIC
SBS	Chr1	25886912	T-A	HOMO	INTERGENIC
SBS	Chr2	28230693	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g46310
SBS	Chr3	1022597	C-A	HOMO	INTRON
SBS	Chr3	6948971	G-C	HET	SYNONYMOUS_CODING
SBS	Chr4	3116779	C-T	HOMO	STOP_GAINED	LOC_Os04g06010
SBS	Chr6	6968587	G-A	HET	INTERGENIC
SBS	Chr8	9299331	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g15290
SBS	Chr8	19625126	G-A	HET	INTERGENIC
SBS	Chr8	23667308	A-T	HOMO	INTERGENIC
SBS	Chr9	4005627	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os09g07880
SBS	Chr9	20393938	T-C	HET	UTR_3_PRIME
SBS	Chr9	20418080	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os09g35530
SBS	Chr10	12654956	A-G	HOMO	INTERGENIC
SBS	Chr10	14642524	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g28200
SBS	Chr10	14642536	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g28200
SBS	Chr11	10184903	G-A	HET	INTERGENIC
SBS	Chr11	20621356	G-T	HOMO	INTERGENIC
SBS	Chr11	24768055	T-G	HET	INTERGENIC
SBS	Chr12	11468824	T-G	HOMO	UTR_3_PRIME

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	809927	809928	1
Deletion	Chr9	1123563	1123564	1
Deletion	Chr1	6146737	6146742	5
Deletion	Chr6	7761394	7761404	10
Deletion	Chr9	13261927	13261940	13
Deletion	Chr2	19748611	19748614	3
Deletion	Chr9	20995720	20999426	3706
Deletion	Chr1	21862205	21862212	7
Deletion	Chr3	24921148	24921149	1
Deletion	Chr6	26395448	26395452	4
Deletion	Chr8	27151782	27632229	480447	72
Deletion	Chr1	33910286	33910294	8
Deletion	Chr1	39765890	39765895	5
Deletion	Chr1	40908649	40908653	4

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	2580941	2580944	4
Insertion	Chr1	21429930	21429930	1

No Inversion

No Translocation

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