Search Results
| Mutant Information |
|---|
| Mutant Name | FN-134 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN-134 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Mapping (Hover to Zoom-In) | 
|
| Variant Information |
|---|
Single base substitutions: 18
| Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
|---|---|---|---|---|---|---|
| SBS | Chr1 | 20596203 | G-A | HET | INTRON | |
| SBS | Chr2 | 14893121 | T-C | HET | INTERGENIC | |
| SBS | Chr2 | 20715840 | C-T | HET | INTERGENIC | |
| SBS | Chr3 | 9318748 | C-A | HOMO | INTERGENIC | |
| SBS | Chr3 | 21268022 | A-C | HET | INTERGENIC | |
| SBS | Chr4 | 9277964 | T-C | HOMO | INTRON | |
| SBS | Chr4 | 22965552 | C-T | HET | INTERGENIC | |
| SBS | Chr4 | 22965554 | G-T | HET | INTERGENIC | |
| SBS | Chr6 | 26220431 | T-C | HET | INTERGENIC | |
| SBS | Chr6 | 27607057 | A-C | HOMO | INTERGENIC | |
| SBS | Chr7 | 7940234 | T-A | HET | NON_SYNONYMOUS_CODING | LOC_Os07g13870 |
| SBS | Chr7 | 7940235 | G-T | HET | NON_SYNONYMOUS_CODING | LOC_Os07g13870 |
| SBS | Chr7 | 9093934 | A-T | HET | INTRON | |
| SBS | Chr7 | 14280949 | C-T | HET | INTRON | |
| SBS | Chr9 | 14750031 | G-A | HET | INTERGENIC | |
| SBS | Chr9 | 18321542 | G-T | HOMO | INTERGENIC | |
| SBS | Chr11 | 19210873 | G-A | HET | INTERGENIC | |
| SBS | Chr12 | 3751589 | C-T | HET | INTERGENIC |
Deletions: 5
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Deletion | Chr10 | 9861434 | 9861439 | 5 | 2 |
| Deletion | Chr3 | 10709200 | 10709202 | 2 | |
| Deletion | Chr2 | 13149460 | 13149465 | 5 | LOC_Os02g22090 |
| Deletion | Chr6 | 15315066 | 15315069 | 3 | |
| Deletion | Chr3 | 26157001 | 26193000 | 36000 | 4 |
No Insertion
No Inversion
No Translocation