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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	330645	C-T	HOMO	INTRON
SBS	Chr1	14155411	C-T	HET	INTERGENIC
SBS	Chr1	14612680	A-T	HOMO	INTRON
SBS	Chr1	25901495	T-A	HET	INTERGENIC
SBS	Chr2	9241354	T-A	HET	INTRON
SBS	Chr3	23365620	C-T	HOMO	INTERGENIC
SBS	Chr3	28641579	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g50230
SBS	Chr3	29447784	T-C	HET	INTERGENIC
SBS	Chr4	43089	G-A	HOMO	INTERGENIC
SBS	Chr4	5011921	G-T	HOMO	INTERGENIC
SBS	Chr4	17589906	T-C	HET	INTERGENIC
SBS	Chr4	27425187	C-A	HET	INTRON
SBS	Chr5	9169201	A-G	HET	INTERGENIC
SBS	Chr6	26968906	G-T	HET	INTERGENIC
SBS	Chr7	17017847	G-A	HET	INTRON
SBS	Chr7	26629866	C-T	HOMO	INTRON
SBS	Chr7	29205616	G-T	HET	INTERGENIC
SBS	Chr9	1494327	G-C	HET	INTERGENIC
SBS	Chr9	4135989	C-G	HET	INTRON
SBS	Chr9	15836653	T-A	HOMO	INTERGENIC
SBS	Chr9	15836654	T-A	HOMO	INTERGENIC
SBS	Chr9	19353807	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os09g32410
SBS	Chr9	19835876	C-G	HET	INTERGENIC
SBS	Chr10	19994220	A-G	HET	INTERGENIC
SBS	Chr11	17158004	C-T	HET	INTRON
SBS	Chr12	19577855	C-A	HOMO	INTERGENIC
SBS	Chr12	19577856	C-A	HOMO	INTERGENIC

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	776102	776115	13
Deletion	Chr7	1094123	1094125	2	LOC_Os07g02930
Deletion	Chr6	3503250	3503263	13
Deletion	Chr9	4164001	4176000	12000	2
Deletion	Chr5	4725772	4725776	4
Deletion	Chr6	10079200	10079201	1
Deletion	Chr12	14183886	14183888	2
Deletion	Chr9	16030630	16030638	8	LOC_Os09g26530
Deletion	Chr5	16050346	16050347	1
Deletion	Chr3	16207205	16207213	8
Deletion	Chr3	16662198	16662199	1	LOC_Os03g29270
Deletion	Chr1	20037255	20037256	1
Deletion	Chr5	20411804	20411808	4
Deletion	Chr4	33569426	33569455	29

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	6316576	6316581	6

No Inversion

No Translocation

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