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Mutant Information

Variant Information

Single base substitutions: 3

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr3	34066818	G-A	Homo	INTERGENIC
SBS	Chr6	23207286	T-C	Homo	INTRON
SBS	Chr9	8720776	G-T	Homo	INTRON

Deletions: 30

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	721502	721681	179
Deletion	Chr6	1559531	1559533	2	LOC_Os06g03860
Deletion	Chr5	2827091	2827104	13
Deletion	Chr8	3091418	3091424	6
Deletion	Chr10	3773993	3773997	4
Deletion	Chr1	4178270	4178272	2
Deletion	Chr8	5679754	5680267	513
Deletion	Chr1	6432554	6432555	1	LOC_Os01g11880
Deletion	Chr1	6432555	6432556	1	LOC_Os01g11880
Deletion	Chr12	6804001	6874000	70000	11
Deletion	Chr7	7073428	7073435	7
Deletion	Chr9	9090374	9090375	1
Deletion	Chr12	9709477	9709478	1
Deletion	Chr3	10617737	10617738	1
Deletion	Chr9	11129642	11129650	8
Deletion	Chr12	12260885	12260918	33	LOC_Os12g21784
Deletion	Chr9	13979599	13979601	2
Deletion	Chr9	15654620	15654624	4
Deletion	Chr3	16347826	16347846	20	LOC_Os03g28370
Deletion	Chr5	17358575	17358589	14
Deletion	Chr11	18427127	18427135	8
Deletion	Chr10	20554519	20554782	263
Deletion	Chr1	21701766	21701789	23	LOC_Os01g38620
Deletion	Chr11	24654363	24654375	12
Deletion	Chr4	25655001	25666000	11000	LOC_Os04g43390
Deletion	Chr4	25676001	25697000	21000	LOC_Os04g43410
Deletion	Chr2	26124054	26124073	19
Deletion	Chr5	26610468	26610480	12	LOC_Os05g45920
Deletion	Chr2	31140657	31140695	38
Deletion	Chr2	33110607	33110608	1

Insertions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	17069001	17069002	2
Insertion	Chr4	31361106	31361174	69
Insertion	Chr3	25966274	25966325	52
Insertion	Chr2	16403433	16403465	33
Insertion	Chr11	19639316	19639327	12
Insertion	Chr3	15406674	15406679	6
Insertion	Chr6	17446736	17446741	6
Insertion	Chr7	3527113	3527117	5
Insertion	Chr10	1742093	1742096	4
Insertion	Chr12	3092829	3092832	4
Insertion	Chr2	21458409	21458412	4
Insertion	Chr4	23881492	23881495	4
Insertion	Chr5	6402287	6402290	4
Insertion	Chr10	2191192	2191194	3
Insertion	Chr1	1946332	1946333	2
Insertion	Chr1	23079848	23079849	2
Insertion	Chr1	42774203	42774204	2
Insertion	Chr11	871553	871554	2
Insertion	Chr11	22202276	22202277	2
Insertion	Chr2	18089824	18089825	2
Insertion	Chr2	19791930	19791931	2
Insertion	Chr3	16708020	16708021	2
Insertion	Chr7	19025978	19025979	2
Insertion	Chr7	26267327	26267328	2
Insertion	Chr8	15066551	15066552	2	LOC_Os08g24900
Insertion	Chr9	19638827	19638828	2
Insertion	Chr11	22875598	22875598	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	14909991	15657080	LOC_Os07g25990
Inversion	Chr12	24497147	24642536	2
Inversion	Chr4	25666064	25697459	LOC_Os04g43390
Inversion	Chr4	30885462	31663737	LOC_Os04g53170

No Translocation

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