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Mutant Information

Variant Information

Single base substitutions: 3

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	37972381	A-G	Homo	INTERGENIC
SBS	Chr6	20882616	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g35780
SBS	Chr7	8889394	A-C	Homo	INTERGENIC

Deletions: 31

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	453481	453501	20
Deletion	Chr10	2461210	2461211	1
Deletion	Chr12	2465857	2465870	13
Deletion	Chr11	4734577	4734591	14
Deletion	Chr10	5320508	5320509	1
Deletion	Chr9	6020692	6020701	9
Deletion	Chr3	6079419	6079422	3	LOC_Os03g11650
Deletion	Chr3	8138307	8138323	16
Deletion	Chr3	8204656	8204657	1
Deletion	Chr3	10137793	10137798	5
Deletion	Chr6	10997122	10997208	86
Deletion	Chr6	14145699	14145702	3
Deletion	Chr12	14509114	14509125	11	LOC_Os12g25220
Deletion	Chr7	16175693	16175696	3
Deletion	Chr8	16367860	16367873	13
Deletion	Chr6	17702482	17702491	9
Deletion	Chr11	17800526	17800527	1
Deletion	Chr1	19164346	19164353	7
Deletion	Chr5	20303379	20303386	7
Deletion	Chr3	20604589	20604597	8	LOC_Os03g37194
Deletion	Chr12	21553468	21553477	9
Deletion	Chr9	21689475	21689491	16
Deletion	Chr5	23070862	23070867	5	LOC_Os05g39330
Deletion	Chr7	23446589	23446599	10
Deletion	Chr7	23513869	23513870	1
Deletion	Chr4	25925610	25925616	6
Deletion	Chr5	29756382	29756383	1
Deletion	Chr2	33952938	33952947	9
Deletion	Chr3	35235814	35235818	4
Deletion	Chr1	36712750	36712751	1
Deletion	Chr1	37924010	37924016	6

Insertions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	2549378	2549399	22
Insertion	Chr1	2713653	2713654	2
Insertion	Chr1	43059641	43059641	1
Insertion	Chr10	14416901	14416901	1
Insertion	Chr11	6888331	6888334	4	LOC_Os11g12340
Insertion	Chr11	7254958	7254959	2
Insertion	Chr2	10135304	10135307	4	LOC_Os02g17620
Insertion	Chr2	15314956	15314958	3
Insertion	Chr2	7930775	7930776	2
Insertion	Chr2	9518323	9518324	2
Insertion	Chr3	12114390	12114391	2
Insertion	Chr4	34913717	34913717	1
Insertion	Chr4	368582	368585	4
Insertion	Chr5	18832874	18832875	2
Insertion	Chr5	19049178	19049179	2
Insertion	Chr6	11217514	11217514	1
Insertion	Chr6	28120293	28120298	6
Insertion	Chr7	11364199	11364218	20
Insertion	Chr7	12793853	12793855	3
Insertion	Chr7	22930902	22930903	2	LOC_Os07g38240
Insertion	Chr7	24313236	24313237	2
Insertion	Chr7	24573851	24573852	2
Insertion	Chr7	24980248	24980252	5
Insertion	Chr7	29661649	29661650	2
Insertion	Chr8	1209775	1209784	10
Insertion	Chr8	19334895	19334896	2
Insertion	Chr8	20486314	20486317	4
Insertion	Chr8	7934523	7934523	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	4894372	29185531	LOC_Os03g51050
Inversion	Chr2	17021296	17198424	LOC_Os02g29040
Inversion	Chr5	27599719	28003018

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	14285625	Chr2	3922470	2
Translocation	Chr3	15560364	Chr2	17199004	LOC_Os02g29040
Translocation	Chr3	15560365	Chr2	17198428	LOC_Os02g29040
Translocation	Chr11	21779399	Chr6	13869717

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