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Mutant Information

SOS indicates the sequenced line is sterile and seeds from siblings are available.

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20883107	G-C	HOMO	INTERGENIC
SBS	Chr1	34398082	A-G	HET	INTERGENIC
SBS	Chr1	8744288	T-G	HOMO	INTERGENIC
SBS	Chr10	15414384	T-G	HOMO	INTRON
SBS	Chr11	10082376	C-G	HET	INTRON
SBS	Chr11	25130806	G-A	HET	INTERGENIC
SBS	Chr11	8928074	T-G	HET	SYNONYMOUS_CODING
SBS	Chr2	19996147	T-C	HET	INTERGENIC
SBS	Chr2	20537786	G-A	HET	INTRON
SBS	Chr2	20895932	T-C	HET	INTERGENIC
SBS	Chr3	16844022	G-A	HET	INTERGENIC
SBS	Chr4	11821108	G-A	HET	INTERGENIC
SBS	Chr4	35398497	G-A	HET	INTERGENIC
SBS	Chr5	5282875	C-G	HET	INTERGENIC
SBS	Chr5	5282877	T-C	HET	INTERGENIC
SBS	Chr5	9828863	G-A	HET	INTERGENIC
SBS	Chr7	11594291	T-C	HOMO	INTRON
SBS	Chr7	23270091	C-T	HET	INTERGENIC
SBS	Chr7	26525904	C-A	HET	INTRON
SBS	Chr7	7340213	C-T	HET	INTERGENIC
SBS	Chr8	16005965	G-A	HET	INTERGENIC
SBS	Chr8	20499483	G-A	HET	INTERGENIC
SBS	Chr9	12090773	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os09g20180
SBS	Chr9	18925308	A-G	HOMO	INTERGENIC
SBS	Chr9	5705343	G-A	HET	INTERGENIC

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	11703001	12064000	361000	51
Deletion	Chr9	14063135	14063140	5
Deletion	Chr9	14140001	14155000	15000	3
Deletion	Chr10	17117169	17117179	10
Deletion	Chr10	19610876	19610882	6	LOC_Os10g36650
Deletion	Chr10	21576977	21576987	10	LOC_Os10g40260
Deletion	Chr6	28199372	28199373	1

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	23591693	23591693	1
Insertion	Chr9	15020241	15020242	2

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	823757	840903	LOC_Os05g02435
Inversion	Chr4	17816847	18047410	2
Inversion	Chr4	18039318	18047399	2
Inversion	Chr12	27481332	27508540	2
Inversion	Chr12	27497798	27508529	LOC_Os12g44360

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	3421175	Chr9	8100460
Translocation	Chr12	3421543	Chr9	8100363

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