Search Results

Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	5740844	G-A	HET	INTERGENIC
SBS	Chr1	23736625	G-A	HET	INTERGENIC
SBS	Chr1	25401293	C-T	HET	INTERGENIC
SBS	Chr2	2198902	T-C	HET	INTERGENIC
SBS	Chr2	10798931	G-C	HOMO	INTERGENIC
SBS	Chr2	10801603	A-T	HOMO	STOP_GAINED	LOC_Os02g18530
SBS	Chr2	10803875	G-T	HOMO	INTRON
SBS	Chr2	20324933	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os02g34030
SBS	Chr2	26404467	G-A	HOMO	INTERGENIC
SBS	Chr2	26404468	G-A	HOMO	INTERGENIC
SBS	Chr2	26404469	G-A	HOMO	INTERGENIC
SBS	Chr3	14604353	A-G	HET	INTERGENIC
SBS	Chr3	20236156	T-A	HET	INTERGENIC
SBS	Chr3	20809467	G-A	HET	INTRON
SBS	Chr3	24320024	C-T	HET	INTERGENIC
SBS	Chr3	30415258	G-C	HOMO	INTERGENIC
SBS	Chr4	1532897	G-C	HET	INTERGENIC
SBS	Chr4	2640946	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os04g05300
SBS	Chr4	2645331	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os04g05310
SBS	Chr5	28256208	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g49250
SBS	Chr6	1092711	C-T	HET	INTERGENIC
SBS	Chr6	20543258	C-T	HET	INTERGENIC
SBS	Chr7	15794106	C-G	HET	INTERGENIC
SBS	Chr9	15740972	G-A	HET	INTERGENIC
SBS	Chr9	15740973	G-A	HET	INTERGENIC
SBS	Chr10	18208129	C-T	HET	INTERGENIC
SBS	Chr11	12817929	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g22350
SBS	Chr11	26982452	T-A	HOMO	INTERGENIC
SBS	Chr12	7931543	C-T	HOMO	INTERGENIC
SBS	Chr12	7931544	C-T	HOMO	INTERGENIC
SBS	Chr12	22560377	C-T	HET	INTERGENIC

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	202558	202559	1
Deletion	Chr11	2069087	2069088	1	LOC_Os11g04860
Deletion	Chr12	2079402	2079403	1	LOC_Os12g04840
Deletion	Chr6	3034283	3034298	15
Deletion	Chr10	6208984	6208988	4	LOC_Os10g11200
Deletion	Chr9	8094382	8094400	18
Deletion	Chr5	8379292	8379314	22
Deletion	Chr10	12152677	12152678	1
Deletion	Chr5	15780306	15780311	5
Deletion	Chr4	16650253	16650260	7
Deletion	Chr4	17316183	17316185	2
Deletion	Chr3	18548000	18548011	11
Deletion	Chr1	18990815	18990816	1
Deletion	Chr12	19353105	19353106	1
Deletion	Chr11	20210159	20210160	1	LOC_Os11g34500
Deletion	Chr12	21467102	21467106	4
Deletion	Chr3	22244008	22244015	7	LOC_Os03g40040
Deletion	Chr2	23468434	23468454	20
Deletion	Chr5	25141388	25141392	4
Deletion	Chr3	25851264	25851266	2	LOC_Os03g45770
Deletion	Chr2	25921001	25976000	55000	9
Deletion	Chr1	28533617	28533619	2	LOC_Os01g49614
Deletion	Chr1	30281173	30281174	1
Deletion	Chr3	31078582	31078587	5	LOC_Os03g54200
Deletion	Chr4	31578057	31578153	96	LOC_Os04g53030
Deletion	Chr1	34170558	34170559	1
Deletion	Chr1	37145763	37145765	2

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	5819076	5819077	2
Insertion	Chr7	17244955	17244966	12	LOC_Os07g29360
Insertion	Chr1	19459469	19459477	9
Insertion	Chr5	4809099	4809101	3
Insertion	Chr11	23050004	23050005	2
Insertion	Chr2	19353409	19353410	2	LOC_Os02g32650
Insertion	Chr6	29472167	29472168	2
Insertion	Chr7	24313236	24313237	2
Insertion	Chr2	5234238	5234238	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr5	10716513	11894428
Inversion	Chr5	10716527	11894734
Inversion	Chr6	17851513	17857316

No Translocation

Main menu