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Mutant Information

Variant Information

Single base substitutions: 17

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	14312413	A-C	HOMO	INTRON
SBS	Chr10	19287542	T-A	HOMO	INTERGENIC
SBS	Chr11	11917951	T-G	HOMO	INTRON
SBS	Chr12	21786858	T-G	HET	INTERGENIC
SBS	Chr2	13876898	C-G	HET	INTRON
SBS	Chr2	3532557	A-G	HET	INTERGENIC
SBS	Chr3	33911564	C-G	HOMO	INTERGENIC
SBS	Chr3	5024961	G-A	HOMO	INTERGENIC
SBS	Chr5	14996731	G-A	HET	INTERGENIC
SBS	Chr5	5110639	T-C	HOMO	INTERGENIC
SBS	Chr5	609600	A-G	HOMO	INTERGENIC
SBS	Chr6	22142236	T-A	HET	INTERGENIC
SBS	Chr6	26753273	A-G	HET	INTRON
SBS	Chr7	22381002	G-T	HET	INTERGENIC
SBS	Chr7	2458484	T-G	HOMO	UTR_3_PRIME
SBS	Chr8	11002016	G-A	HOMO	INTERGENIC
SBS	Chr8	25788984	G-C	HET	INTERGENIC

Deletions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	470497	470498	1	LOC_Os08g01780
Deletion	Chr1	955520	955534	14
Deletion	Chr12	1197919	1197924	5
Deletion	Chr6	1321881	1321883	2	LOC_Os06g03460
Deletion	Chr11	1716740	1716753	13
Deletion	Chr5	6560902	6560907	5
Deletion	Chr2	8066532	8066546	14
Deletion	Chr12	8642252	8642256	4
Deletion	Chr3	8811847	8816888	5041	LOC_Os03g15990
Deletion	Chr6	9210670	9210671	1
Deletion	Chr8	9790846	9790850	4
Deletion	Chr12	12353629	12353639	10	LOC_Os12g21930
Deletion	Chr8	12966123	12966238	115
Deletion	Chr9	13132208	13132216	8
Deletion	Chr10	13617248	13617260	12
Deletion	Chr4	14182001	14390000	208000	26
Deletion	Chr2	15838929	15838948	19
Deletion	Chr11	17262230	17337855	75625	12
Deletion	Chr3	18782001	18797000	15000	3
Deletion	Chr6	19663922	19666182	2260	LOC_Os06g33810
Deletion	Chr7	20626762	20626776	14
Deletion	Chr11	23299252	23299271	19
Deletion	Chr6	26755418	27085871	330453	52
Deletion	Chr4	32232781	32232786	5

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	2713653	2713654	2
Insertion	Chr1	42357357	42357362	6
Insertion	Chr2	33662626	33662626	1
Insertion	Chr5	7365322	7365323	2
Insertion	Chr6	21400148	21400148	1
Insertion	Chr6	6166307	6166308	2
Insertion	Chr7	25997985	25997985	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	17688475	18281146
Inversion	Chr9	17688509	18281190

No Translocation

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