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Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	36308300	G-A	HET	INTERGENIC
SBS	Chr1	3780922	C-A	HET	INTRON
SBS	Chr1	6197176	T-G	HOMO	INTERGENIC
SBS	Chr1	6316391	G-A	HOMO	INTERGENIC
SBS	Chr1	8783293	A-T	HOMO	INTERGENIC
SBS	Chr10	19294465	C-T	HET	INTERGENIC
SBS	Chr11	3915344	G-C	HET	INTERGENIC
SBS	Chr11	6486050	A-T	HET	INTERGENIC
SBS	Chr11	6486051	C-T	HET	INTERGENIC
SBS	Chr12	20316549	G-A	HET	INTERGENIC
SBS	Chr12	24302524	C-A	HET	INTERGENIC
SBS	Chr12	9372872	A-T	HET	INTERGENIC
SBS	Chr2	20434283	A-T	HOMO	INTERGENIC
SBS	Chr3	14914402	G-A	HOMO	INTERGENIC
SBS	Chr3	14914403	C-A	HOMO	INTERGENIC
SBS	Chr3	21931164	G-T	HET	INTERGENIC
SBS	Chr3	26657410	G-C	HET	UTR_3_PRIME
SBS	Chr3	30805725	T-C	HET	INTRON
SBS	Chr3	911858	C-T	HET	INTERGENIC
SBS	Chr4	11676954	G-A	HOMO	INTERGENIC
SBS	Chr4	11676955	C-A	HOMO	INTERGENIC
SBS	Chr4	11676957	T-A	HOMO	INTERGENIC
SBS	Chr4	28507642	G-A	HET	INTERGENIC
SBS	Chr4	29405429	G-T	HET	INTERGENIC
SBS	Chr4	3945147	T-C	HET	INTERGENIC
SBS	Chr5	28092820	G-A	HET	INTERGENIC
SBS	Chr5	7023764	T-C	HET	INTERGENIC
SBS	Chr6	17364850	G-A	HOMO	INTERGENIC
SBS	Chr7	24131613	C-T	HOMO	INTRON
SBS	Chr7	24152184	A-T	HOMO	INTERGENIC
SBS	Chr7	5474115	G-A	HET	INTRON
SBS	Chr7	6838000	G-T	HET	INTERGENIC
SBS	Chr8	28427283	C-T	HOMO	INTERGENIC
SBS	Chr9	11492764	G-A	HOMO	INTRON
SBS	Chr9	1334638	C-T	HOMO	INTRON
SBS	Chr9	9474505	C-T	HET	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	686980	686987	7
Deletion	Chr10	2820946	2820947	1
Deletion	Chr7	4170293	4170317	24
Deletion	Chr3	4683475	4683485	10
Deletion	Chr3	5792998	5793082	84
Deletion	Chr3	6088858	6088863	5	LOC_Os03g11660
Deletion	Chr10	11402691	11466878	64187	11
Deletion	Chr1	12338625	12338626	1
Deletion	Chr2	13531754	13531755	1	LOC_Os02g22710
Deletion	Chr11	14081001	14670000	589000	89
Deletion	Chr3	14796671	14796672	1
Deletion	Chr3	15130400	15130401	1
Deletion	Chr10	15321001	15806000	485000	81
Deletion	Chr4	18257832	18257837	5
Deletion	Chr12	22415021	22415031	10
Deletion	Chr4	23861232	23861233	1
Deletion	Chr2	25887257	25887259	2
Deletion	Chr11	28836630	28836631	1
Deletion	Chr3	32027313	32027315	2
Deletion	Chr1	37517200	37517201	1

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	16468454	16468457	4	LOC_Os02g27810
Insertion	Chr2	6945150	6945150	1
Insertion	Chr6	23545576	23545578	3
Insertion	Chr7	11740182	11740183	2
Insertion	Chr7	24573851	24573852	2

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	5007562	5857422	2
Inversion	Chr3	5857422	6271359	LOC_Os03g11360
Inversion	Chr10	15321334	15877614
Inversion	Chr10	15806028	15921996	LOC_Os10g30590

No Translocation

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