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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	17658768	T-A	HET	INTERGENIC
SBS	Chr1	22806126	G-T	HET	INTRON
SBS	Chr1	26767556	G-A	HET	INTERGENIC
SBS	Chr1	31054185	C-G	HET	INTERGENIC
SBS	Chr1	4918023	C-T	HOMO	UTR_3_PRIME
SBS	Chr1	6317582	A-T	HOMO	INTERGENIC
SBS	Chr1	6362158	T-A	HOMO	INTRON
SBS	Chr10	15972716	G-A	HOMO	INTERGENIC
SBS	Chr10	8351051	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g16760
SBS	Chr11	11770792	T-G	HET	INTERGENIC
SBS	Chr11	4590638	G-C	HET	INTERGENIC
SBS	Chr11	8465216	A-T	HET	INTERGENIC
SBS	Chr2	12467319	G-A	HET	INTERGENIC
SBS	Chr3	2757533	G-T	HOMO	INTERGENIC
SBS	Chr3	30480940	T-C	HET	INTRON
SBS	Chr3	8690316	C-T	HET	INTRON
SBS	Chr4	10866259	G-A	HET	INTERGENIC
SBS	Chr4	20282248	T-C	HET	INTERGENIC
SBS	Chr4	22191783	G-A	HET	UTR_3_PRIME
SBS	Chr4	22191784	T-A	HET	UTR_3_PRIME
SBS	Chr4	7691024	G-C	HET	INTERGENIC
SBS	Chr4	9281694	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g16950
SBS	Chr5	12145728	T-G	HOMO	INTRON
SBS	Chr5	4128963	A-G	HET	INTERGENIC
SBS	Chr6	24801129	C-T	HET	INTERGENIC
SBS	Chr6	9749258	G-A	HET	INTERGENIC
SBS	Chr7	3319844	C-T	HET	INTRON
SBS	Chr7	6698480	C-T	HET	INTERGENIC
SBS	Chr8	24086378	G-A	HOMO	INTERGENIC
SBS	Chr9	11350754	T-A	HET	INTERGENIC
SBS	Chr9	1911895	T-C	HOMO	INTERGENIC
SBS	Chr9	20325505	A-T	HET	INTRON

Deletions: 29

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	1883744	1883748	4	LOC_Os04g04080
Deletion	Chr2	2104654	2104657	3
Deletion	Chr7	2274209	2274214	5
Deletion	Chr8	2626546	2626548	2
Deletion	Chr7	4067686	4067687	1
Deletion	Chr5	5193922	5241222	47300	7
Deletion	Chr3	5386338	5386367	29	LOC_Os03g10570
Deletion	Chr8	6182850	6182947	97
Deletion	Chr4	6227730	6227731	1
Deletion	Chr1	6343448	6343495	47
Deletion	Chr4	7287780	7287781	1
Deletion	Chr3	7706979	7706991	12	LOC_Os03g14205
Deletion	Chr5	8204186	8204187	1
Deletion	Chr1	9072121	9072126	5
Deletion	Chr1	9515295	9515297	2
Deletion	Chr2	10163945	10163954	9
Deletion	Chr11	13116001	13191000	75000	15
Deletion	Chr1	13516939	13516953	14
Deletion	Chr9	14541352	14541354	2
Deletion	Chr5	14906385	14906471	86
Deletion	Chr11	15023933	15023937	4
Deletion	Chr11	15875001	15887000	12000	2
Deletion	Chr11	17734001	18003000	269000	36
Deletion	Chr8	17941003	17941011	8
Deletion	Chr4	21844822	21844842	20
Deletion	Chr6	24639323	24639325	2
Deletion	Chr11	25349228	25349244	16
Deletion	Chr4	26453982	26453994	12
Deletion	Chr3	34742186	34742188	2

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	27921872	27921872	1
Insertion	Chr12	23551114	23551115	2
Insertion	Chr7	26253345	26253345	1

No Inversion

No Translocation

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