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Mutant Information

Variant Information

Single base substitutions: 8

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	28566540	A-T	Homo	INTERGENIC
SBS	Chr4	10792584	C-T	Homo	SYNONYMOUS_CODING
SBS	Chr4	31304024	G-A	Homo	SYNONYMOUS_CODING
SBS	Chr8	15629369	T-A	Homo	INTERGENIC
SBS	Chr8	17619796	A-G	Homo	INTERGENIC
SBS	Chr8	20593008	T-C	Homo	INTRON
SBS	Chr9	7364849	T-C	Homo	INTERGENIC
SBS	Chr9	8509115	T-A	Homo	INTERGENIC

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	1759361	1759363	2	LOC_Os04g03860
Deletion	Chr8	3009302	3009304	2
Deletion	Chr7	4154485	4154489	4
Deletion	Chr11	6027398	6030939	3541	LOC_Os11g10920
Deletion	Chr8	8572496	8572504	8
Deletion	Chr11	8779533	8779543	10
Deletion	Chr6	8791108	8791109	1
Deletion	Chr7	12859410	12859419	9
Deletion	Chr11	16013711	16013719	8	LOC_Os11g27810
Deletion	Chr11	18074235	18074236	1
Deletion	Chr10	18368092	18368113	21
Deletion	Chr4	18771391	18771393	2
Deletion	Chr6	21564047	21564054	7	LOC_Os06g36680
Deletion	Chr10	22348579	22348583	4
Deletion	Chr4	23224126	23224137	11
Deletion	Chr1	23722001	23728000	6000	LOC_Os01g41870
Deletion	Chr3	25085761	25085764	3
Deletion	Chr11	25185311	25185312	1
Deletion	Chr7	25424652	25424653	1
Deletion	Chr11	25969320	25969329	9
Deletion	Chr1	29273209	29273210	1	LOC_Os01g50940

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr3	30882012	30882012	1
Insertion	Chr4	31913823	31913823	1
Insertion	Chr5	27863457	27863460	4
Insertion	Chr5	4085295	4085295	1
Insertion	Chr6	2922586	2922586	1
Insertion	Chr7	19030465	19030466	2
Insertion	Chr7	25872667	25872667	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	8560146	8644330	LOC_Os11g15290

No Translocation

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