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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	13976517	A-C	HET	INTERGENIC
SBS	Chr10	14432880	A-T	HET	INTERGENIC
SBS	Chr10	15106246	C-T	HET	INTERGENIC
SBS	Chr10	2788113	C-T	HET	INTERGENIC
SBS	Chr10	9265696	G-A	HET	INTERGENIC
SBS	Chr12	10412938	C-A	HOMO	INTERGENIC
SBS	Chr12	11236449	C-A	HOMO	INTERGENIC
SBS	Chr12	4778457	A-G	HOMO	INTERGENIC
SBS	Chr2	23549066	G-A	HET	UTR_3_PRIME
SBS	Chr2	24067117	C-A	HET	INTERGENIC
SBS	Chr2	26409726	G-A	HET	UTR_3_PRIME
SBS	Chr2	27529231	A-T	HET	INTERGENIC
SBS	Chr2	4213916	A-G	HET	INTERGENIC
SBS	Chr4	13696780	C-T	HOMO	INTERGENIC
SBS	Chr4	31048457	G-A	HOMO	INTERGENIC
SBS	Chr4	34619626	C-G	HOMO	INTRON
SBS	Chr5	10291855	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os05g17900
SBS	Chr6	4546367	A-C	HOMO	INTERGENIC
SBS	Chr7	26922399	G-A	HET	INTRON
SBS	Chr7	6765155	A-T	HET	INTRON
SBS	Chr8	11354895	G-A	HET	INTERGENIC
SBS	Chr9	15592429	A-C	HET	SYNONYMOUS_CODING
SBS	Chr9	19742430	G-A	HET	INTERGENIC
SBS	Chr9	364059	C-T	HET	INTERGENIC

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	6499307	6499313	6
Deletion	Chr2	7013334	7013355	21
Deletion	Chr6	9477187	9477191	4
Deletion	Chr7	11853729	11853733	4
Deletion	Chr9	15653052	15653057	5	LOC_Os09g26040
Deletion	Chr3	16325535	16325541	6
Deletion	Chr9	21338646	21338661	15
Deletion	Chr11	24805421	24805432	11
Deletion	Chr4	26346032	26346044	12
Deletion	Chr2	27541324	27541326	2
Deletion	Chr1	31303814	31303815	1
Deletion	Chr1	39353125	39353139	14

No Insertion

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	11538139	11872105	LOC_Os08g19830
Inversion	Chr10	18159796	18180396
Inversion	Chr2	33789366	33964506	LOC_Os02g55150

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr3	31106965	Chr2	33789352	2

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