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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	36810742	G-C	HOMO	INTERGENIC
SBS	Chr2	15590579	G-A	HET	INTERGENIC
SBS	Chr2	32579613	T-C	HET	INTRON
SBS	Chr4	1865781	C-G	HOMO	INTERGENIC
SBS	Chr4	2374167	G-A	HOMO	INTERGENIC
SBS	Chr4	2733272	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g05430
SBS	Chr4	35003253	G-A	HET	INTERGENIC
SBS	Chr6	3089527	A-G	HET	INTERGENIC
SBS	Chr6	10722305	A-G	HOMO	INTERGENIC
SBS	Chr6	25724966	G-A	HET	INTERGENIC
SBS	Chr7	1170429	C-T	HET	INTERGENIC
SBS	Chr8	7779082	C-T	HET	INTERGENIC
SBS	Chr9	14242011	C-T	HET	INTRON
SBS	Chr9	18264546	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g30020
SBS	Chr9	18264549	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g30020
SBS	Chr9	20526973	G-A	HET	INTERGENIC
SBS	Chr10	723145	T-A	HET	INTERGENIC
SBS	Chr10	12427593	A-G	HOMO	INTERGENIC
SBS	Chr10	13712434	A-T	HET	INTRON
SBS	Chr11	7613677	T-C	HET	INTERGENIC
SBS	Chr11	7893420	A-T	HET	INTERGENIC
SBS	Chr11	13933971	T-C	HET	INTERGENIC
SBS	Chr11	18038040	G-A	HET	SYNONYMOUS_CODING
SBS	Chr11	18102220	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g31100
SBS	Chr12	21000848	T-C	HET	INTERGENIC

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	151674	151679	5
Deletion	Chr12	1617365	1617366	1
Deletion	Chr7	1937660	1937661	1
Deletion	Chr1	2647481	2647482	1
Deletion	Chr3	8088243	8088244	1	LOC_Os03g14840
Deletion	Chr1	8495027	8495038	11
Deletion	Chr9	12568107	12568356	249	LOC_Os09g20880
Deletion	Chr1	12736825	12736827	2
Deletion	Chr5	13898460	13898474	14
Deletion	Chr6	14728046	14728047	1
Deletion	Chr6	14867948	14867958	10
Deletion	Chr7	15715577	15715578	1
Deletion	Chr12	19411897	19411904	7
Deletion	Chr2	21762294	21762305	11
Deletion	Chr1	24168704	24170227	1523	LOC_Os01g42510
Deletion	Chr8	26744234	26744266	32
Deletion	Chr5	28460001	28479000	19000	5
Deletion	Chr1	28894329	28894342	13	LOC_Os01g50340
Deletion	Chr7	29384006	29384007	1	LOC_Os07g49080
Deletion	Chr3	30065170	30065201	31
Deletion	Chr3	34226752	34226755	3
Deletion	Chr1	36990419	36990450	31

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	23170448	23170448	1
Insertion	Chr5	5300443	5300443	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	16220512	16225739	LOC_Os11g28210

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	16220505	Chr1	24170207	2
Translocation	Chr11	16225736	Chr1	24168719	LOC_Os01g42510

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