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Mutant Information

Mutant NameFN-26 [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download FN-26 Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 7
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr322843833C-AHomoINTERGENIC
SBSChr629159055C-THomoINTERGENIC
SBSChr83804896G-AHomoINTERGENIC
SBSChr96029287G-THomoINTERGENIC
SBSChr911097347G-AHomoINTERGENIC
SBSChr1112692693A-GHomoINTERGENIC
SBSChr1115091032T-AHomoINTERGENIC

Deletions: 21
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr83138886313891832
DeletionChr8381400138760006200013
DeletionChr8388600139780009200012
DeletionChr94045250404526010LOC_Os09g07920
DeletionChr1631966863196713LOC_Os01g11710
DeletionChr2642657964265801
DeletionChr5719117571911827
DeletionChr87384957738497417
DeletionChr78297878829789012
DeletionChr1110682975106829761
DeletionChr510804117108041269
DeletionChr611647184116471939
DeletionChr8120669031206691815LOC_Os08g20130
DeletionChr51422800114261000330004
DeletionChr517829070178290711
DeletionChr519213650192136511
DeletionChr322857265228572727LOC_Os03g41120
DeletionChr623124900231249022
DeletionChr3247847082478472921
DeletionChr326316222263162231
DeletionChr329795669297956767

No Insertion

Inversions: 1
Variant Type Chromosome Position 1 Position 2 Number of Genes
InversionChr322830890228587512

No Translocation