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Mutant Information

Variant Information

Single base substitutions: 2

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	5621424	C-T	Homo	INTRON
SBS	Chr7	5927618	T-G	Homo	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	139001	179000	40000	11
Deletion	Chr6	1938990	1938999	9	LOC_Os06g04520
Deletion	Chr8	4633841	4633845	4	LOC_Os08g08140
Deletion	Chr12	11302870	11302872	2
Deletion	Chr9	12032374	12032431	57
Deletion	Chr12	12260476	12260488	12	LOC_Os12g21784
Deletion	Chr11	16669642	16669643	1
Deletion	Chr9	16811752	16811753	1
Deletion	Chr11	17055151	17055152	1
Deletion	Chr10	20395138	20395143	5	LOC_Os10g38090
Deletion	Chr4	25295001	25400000	105000	19
Deletion	Chr8	25329001	25396000	67000	15
Deletion	Chr4	25612225	25614814	2589	LOC_Os04g43300
Deletion	Chr8	26142273	26142297	24	LOC_Os08g41390
Deletion	Chr6	27288677	27288679	2
Deletion	Chr5	27928703	27928707	4
Deletion	Chr3	28776197	28776210	13
Deletion	Chr3	30342815	30342826	11
Deletion	Chr3	32142039	32142043	4
Deletion	Chr1	41064268	41064300	32

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	19526014	19526014	1
Insertion	Chr2	33915860	33915860	1
Insertion	Chr2	73997	73997	1
Insertion	Chr6	11552931	11552931	1	LOC_Os06g20140

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	2561401	14315772
Inversion	Chr8	25091651	25328850	2
Inversion	Chr4	25296076	29480891	LOC_Os04g49394
Inversion	Chr2	27790399	29195322	2

No Translocation

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