Search Results

Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11242848	G-A	HOMO	INTERGENIC
SBS	Chr1	14618445	C-A	HET	INTERGENIC
SBS	Chr1	36926814	C-T	HET	INTERGENIC
SBS	Chr1	38204143	A-C	HET	INTERGENIC
SBS	Chr2	4811068	C-G	HOMO	INTRON
SBS	Chr2	10564645	G-T	HOMO	INTERGENIC
SBS	Chr2	27250184	T-A	HOMO	UTR_3_PRIME
SBS	Chr2	28850949	A-G	HOMO	INTERGENIC
SBS	Chr2	32005638	T-C	HET	INTERGENIC
SBS	Chr2	34553784	C-G	HET	INTERGENIC
SBS	Chr3	5230178	T-A	HET	INTERGENIC
SBS	Chr3	6578024	A-G	HET	INTRON
SBS	Chr3	16739583	C-T	HET	INTERGENIC
SBS	Chr3	22537409	C-G	HET	INTERGENIC
SBS	Chr4	8845046	G-A	HET	INTERGENIC
SBS	Chr4	15375698	T-G	HET	INTERGENIC
SBS	Chr5	296785	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g01500
SBS	Chr5	15602732	G-T	HET	INTERGENIC
SBS	Chr5	15602733	T-G	HET	INTERGENIC
SBS	Chr5	15602735	G-T	HET	INTERGENIC
SBS	Chr5	28825478	C-T	HET	INTERGENIC
SBS	Chr7	2573155	G-A	HET	INTERGENIC
SBS	Chr8	6331188	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g10770
SBS	Chr8	8400718	C-T	HET	INTERGENIC
SBS	Chr8	9479711	G-T	HET	INTRON
SBS	Chr8	12549010	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g20952
SBS	Chr8	13595264	C-T	HET	INTERGENIC
SBS	Chr11	15340981	G-A	HET	INTERGENIC
SBS	Chr11	25165647	C-T	HET	INTERGENIC
SBS	Chr12	5511171	G-T	HET	INTRON
SBS	Chr12	24696565	G-C	HOMO	INTERGENIC
SBS	Chr12	25736482	G-C	HET	INTERGENIC

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	587125	587131	6
Deletion	Chr5	1262996	1262997	1
Deletion	Chr9	2714143	2714144	1
Deletion	Chr6	2957241	2957243	2	LOC_Os06g06350
Deletion	Chr5	3717406	3717409	3
Deletion	Chr11	5570839	5570841	2	LOC_Os11g10260
Deletion	Chr8	8396276	8396281	5
Deletion	Chr11	13200163	13200171	8	LOC_Os11g22960
Deletion	Chr1	16024552	16024577	25
Deletion	Chr12	17832852	17832853	1
Deletion	Chr3	21184001	21432000	248000	41
Deletion	Chr11	23416660	23416673	13	LOC_Os11g39330
Deletion	Chr7	23806402	23806411	9
Deletion	Chr12	25940393	25940425	32
Deletion	Chr7	27009775	27009777	2
Deletion	Chr2	30024628	30024631	3
Deletion	Chr2	31281158	31281160	2	LOC_Os02g51119
Deletion	Chr2	31333575	31333578	3	LOC_Os02g51200
Deletion	Chr3	31709001	31724000	15000	LOC_Os03g55704
Deletion	Chr3	32064134	32064136	2
Deletion	Chr1	42020001	42244000	224000	32

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	37654897	37654898	2
Insertion	Chr5	5992211	5992214	4
Insertion	Chr1	2713653	2713654	2
Insertion	Chr3	30016613	30016613	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	12458229	15047120
Inversion	Chr11	17201500	20397027	LOC_Os11g34820
Inversion	Chr1	41846894	42019554	LOC_Os01g72150
Inversion	Chr1	41846938	42243948	2

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	4466665	Chr3	21232064	2
Translocation	Chr10	10928861	Chr7	15046864
Translocation	Chr10	11009945	Chr7	12458226
Translocation	Chr12	13392781	Chr7	12441392
Translocation	Chr11	15401594	Chr10	3537148
Translocation	Chr5	22048732	Chr2	32190495
Translocation	Chr12	24683728	Chr2	5772738

Main menu