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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15802352	A-G	HOMO	INTERGENIC
SBS	Chr1	28566540	A-T	HOMO	INTERGENIC
SBS	Chr1	31843836	T-C	HOMO	INTERGENIC
SBS	Chr1	40685653	T-A	HOMO	INTERGENIC
SBS	Chr10	5486005	T-A	HOMO	INTERGENIC
SBS	Chr10	6796080	T-G	HET	INTRON
SBS	Chr11	23083681	G-C	HET	INTERGENIC
SBS	Chr11	23083682	A-T	HET	INTERGENIC
SBS	Chr11	27243606	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g44990
SBS	Chr12	18836500	G-A	HET	INTRON
SBS	Chr12	22409167	A-G	HET	INTRON
SBS	Chr3	26684349	C-T	HET	INTERGENIC
SBS	Chr3	30593583	T-C	HOMO	INTRON
SBS	Chr4	10792584	C-T	HET	SYNONYMOUS_CODING
SBS	Chr4	1538725	C-T	HET	INTERGENIC
SBS	Chr4	17691540	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g29700
SBS	Chr4	18303215	T-A	HET	INTERGENIC
SBS	Chr5	24193916	C-T	HOMO	INTERGENIC
SBS	Chr6	12683419	T-G	HET	INTERGENIC
SBS	Chr6	28069058	A-C	HET	INTERGENIC
SBS	Chr6	444168	A-T	HET	INTERGENIC
SBS	Chr7	5569715	A-G	HOMO	INTRON
SBS	Chr8	546084	C-T	HOMO	INTERGENIC
SBS	Chr9	20376333	A-T	HET	INTERGENIC

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr8	1786762	1786764	2
Deletion	Chr3	5827223	5827224	1
Deletion	Chr6	8166516	8166517	1
Deletion	Chr10	9826240	9826241	1
Deletion	Chr5	17684107	17684108	1
Deletion	Chr5	19090874	19090875	1
Deletion	Chr4	20574010	20574011	1
Deletion	Chr3	26767230	26767232	2
Deletion	Chr6	28062911	28062912	1
Deletion	Chr6	28319214	28319225	11
Deletion	Chr4	30086900	30086912	12
Deletion	Chr2	30861174	30861184	10
Deletion	Chr2	31412436	31412448	12
Deletion	Chr2	32214826	32214829	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	16636422	16636422	1
Insertion	Chr4	23975178	23975178	1
Insertion	Chr5	2567681	2567682	2
Insertion	Chr7	24573851	24573852	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	19750378	19960320	LOC_Os09g33490

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr3	6170996	Chr2	12573360	2
Translocation	Chr3	6170997	Chr2	12572983	2

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