Search Results

Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	25842124	A-G	HOMO	INTRON
SBS	Chr1	33785147	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os01g58444
SBS	Chr2	3032719	G-A	HET	INTERGENIC
SBS	Chr2	13522499	G-A	HET	INTERGENIC
SBS	Chr2	18778552	G-A	HOMO	INTERGENIC
SBS	Chr3	7104873	G-A	HET	INTERGENIC
SBS	Chr3	9863238	T-C	HET	INTERGENIC
SBS	Chr3	18154591	A-G	HET	INTRON
SBS	Chr3	20383233	A-G	HET	INTRON
SBS	Chr4	11790761	G-T	HET	INTRON
SBS	Chr4	19760479	C-T	HET	INTERGENIC
SBS	Chr5	2716295	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g05450
SBS	Chr5	2981173	T-A	HOMO	INTERGENIC
SBS	Chr5	13273413	C-T	HET	INTRON
SBS	Chr6	846389	A-G	HET	INTERGENIC
SBS	Chr6	7691876	C-T	HET	INTERGENIC
SBS	Chr6	9667472	T-C	HET	INTERGENIC
SBS	Chr7	3572726	G-A	HET	INTERGENIC
SBS	Chr7	21780851	G-A	HOMO	INTERGENIC
SBS	Chr8	2402396	T-C	HET	INTERGENIC
SBS	Chr9	5791823	C-T	HET	INTERGENIC
SBS	Chr9	8238130	C-T	HOMO	INTERGENIC
SBS	Chr9	8591773	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os09g14520
SBS	Chr11	15059845	C-A	HET	INTRON
SBS	Chr12	9528025	G-T	HET	INTERGENIC
SBS	Chr12	13732556	G-A	HET	INTERGENIC
SBS	Chr12	14836381	C-T	HET	INTERGENIC
SBS	Chr12	15158304	C-A	HET	INTERGENIC
SBS	Chr12	19477213	C-T	HET	INTRON

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	844106	844124	18	LOC_Os06g02440
Deletion	Chr2	1053860	1053867	7
Deletion	Chr2	2032200	2032214	14
Deletion	Chr12	2711449	2711464	15
Deletion	Chr8	2848001	2861000	13000	2
Deletion	Chr2	3031698	3031728	30
Deletion	Chr2	6627386	6627387	1
Deletion	Chr2	6982595	6982602	7	LOC_Os02g13130
Deletion	Chr3	6998221	6999209	988
Deletion	Chr10	7359488	7359491	3
Deletion	Chr4	8287922	8287941	19	LOC_Os04g14770
Deletion	Chr3	8296874	8296881	7
Deletion	Chr3	10869375	10869384	9
Deletion	Chr6	12024422	12024423	1
Deletion	Chr10	14233070	14233079	9
Deletion	Chr9	14703827	14703833	6
Deletion	Chr7	17468309	17468310	1
Deletion	Chr5	17598208	17598213	5	LOC_Os05g30350
Deletion	Chr11	20381101	20381112	11
Deletion	Chr10	22423168	22423173	5
Deletion	Chr12	24875164	24875166	2
Deletion	Chr3	26084918	26084923	5

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	21109752	21109752	1
Insertion	Chr5	29050516	29050516	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	12387295	12786571	LOC_Os12g22020
Inversion	Chr8	21607110	22451156	LOC_Os08g34420

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	13350485	Chr3	6998235	LOC_Os08g22130
Translocation	Chr8	13350501	Chr3	6999109	LOC_Os08g22130

Main menu