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Mutant Information

Mutant NameFN-333 [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download FN-333 Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 18
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr111510599C-THETINTERGENIC
SBSChr120846094T-CHETINTERGENIC
SBSChr1011783731G-AHOMOINTERGENIC
SBSChr1219366720G-CHOMOINTERGENIC
SBSChr22764867A-THETINTERGENIC
SBSChr327980559A-CHETNON_SYNONYMOUS_CODINGLOC_Os03g49120
SBSChr33268638G-THETNON_SYNONYMOUS_CODINGLOC_Os03g06510
SBSChr420460841A-THETINTRON
SBSChr423025669A-THETSYNONYMOUS_CODING
SBSChr43904681A-THETNON_SYNONYMOUS_CODINGLOC_Os04g07340
SBSChr514139309A-GHETINTERGENIC
SBSChr612936826G-AHOMOINTERGENIC
SBSChr623457275C-THOMOINTERGENIC
SBSChr716701116G-AHOMOSYNONYMOUS_CODING
SBSChr721914316A-THETINTRON
SBSChr723395834A-THOMOINTRON
SBSChr814224285T-CHETINTRON
SBSChr92354533T-CHETINTERGENIC

Deletions: 11
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr121572492157250614
DeletionChr11382288338228841
DeletionChr5701516870151735
DeletionChr1198820011020900032700037
DeletionChr11102150011038200016700019
DeletionChr2129016561290167216
DeletionChr1134594431345945411
DeletionChr519414505194145149
DeletionChr4301767353017675318
DeletionChr332312959323129612
DeletionChr432987362329873631

Insertions: 1
Variant Type Chromosome Start End Size (bp) Number of Genes
InsertionChr135079879350798791

Inversions: 2
Variant Type Chromosome Position 1 Position 2 Number of Genes
InversionChr61203669417004684LOC_Os06g29650
InversionChr111406473920190798

Translocations: 1
Variant Type Chromosome Position 1 Chromosome Position 2 Number of Genes
TranslocationChr823711996Chr219344581