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Mutant Information

Mutant NameFN-365 [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download FN-365 Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 20
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr111560255A-CHOMOINTERGENIC
SBSChr129148506T-CHETINTERGENIC
SBSChr1116164231T-CHETUTR_3_PRIME
SBSChr118531251C-AHETNON_SYNONYMOUS_CODINGLOC_Os11g15130
SBSChr125090319G-AHETINTERGENIC
SBSChr222554833G-AHETINTERGENIC
SBSChr323057885C-GHOMOINTRON
SBSChr411615250C-THETNON_SYNONYMOUS_CODINGLOC_Os04g20720
SBSChr426512393A-THETINTRON
SBSChr426512394T-CHETINTRON
SBSChr51878874C-AHETINTERGENIC
SBSChr522486506A-THETINTERGENIC
SBSChr529655508G-AHOMOINTERGENIC
SBSChr529655509C-AHOMOINTERGENIC
SBSChr612574668C-THETINTERGENIC
SBSChr68362232T-CHOMOINTERGENIC
SBSChr713766065T-GHETINTERGENIC
SBSChr715325383G-THETINTERGENIC
SBSChr715325419G-AHETINTERGENIC
SBSChr8610256C-AHETINTERGENIC

Deletions: 14
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr3212448021244855LOC_Os03g04550
DeletionChr12261984526198461
DeletionChr2694608769460881
DeletionChr5121069331210698047
DeletionChr7133010011354800024700039
DeletionChr4166278131662783926
DeletionChr41671200116738000260003
DeletionChr41675700116776000190005
DeletionChr9210836362108364913LOC_Os09g36550
DeletionChr624461843244618485
DeletionChr7254416662544169529LOC_Os07g42510
DeletionChr1125962985259629872
DeletionChr826149148261491546
DeletionChr328265254282652573

No Insertion

Inversions: 1
Variant Type Chromosome Position 1 Position 2 Number of Genes
InversionChr41664614316712273LOC_Os04g28180

Translocations: 1
Variant Type Chromosome Position 1 Chromosome Position 2 Number of Genes
TranslocationChr919770542Chr630593999LOC_Os09g33520